RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 C14orf132Q9NPU4 83 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 MUC4Q99102 2169 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 ATP5G1P05496 136 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 ODF1Q14990 250 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 PTH2Q96A98 100 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 TNRC6AQ8NDV7 1962 aaKnown RBP9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 TRAV26-1A0A087WT03 109 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 HILS1P60008 231 aa9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 MRPL36Q9P0J6 103 aaKnown RBP9.22□□□□□ -0.93
PCDHA9-201ENST00000378122 ATP6V0E2Q8NHE4 81 aa9.21□□□□□ -0.93
PCDHA9-201ENST00000378122 PSMB8P28062 276 aa9.21□□□□□ -0.93
PCDHA9-201ENST00000378122 DEFB1P60022 68 aa9.21□□□□□ -0.93
PCDHA9-201ENST00000378122 TMEM61Q8N0U2 210 aa9.21□□□□□ -0.93
PCDHA9-201ENST00000378122 Q8N1Y9 231 aa9.21□□□□□ -0.94
PCDHA9-201ENST00000378122 HIGD2BQ4VC39 106 aa9.21□□□□□ -0.94
PCDHA9-201ENST00000378122 NOTCH4Q99466 2003 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 GPR179Q6PRD1 2367 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 LOXL1Q08397 574 aaPredicted RBP9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 Q8N9W7 124 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
PCDHA9-201ENST00000378122 CTRLP40313 264 aa9.19□□□□□ -0.94
PCDHA9-201ENST00000378122 TCL1BO95988 128 aa9.19□□□□□ -0.94
PCDHA9-201ENST00000378122 C2orf70A6NJV1 201 aa9.19□□□□□ -0.94
PCDHA9-201ENST00000378122 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
PCDHA9-201ENST00000378122 H0Y9J4 135 aa9.19□□□□□ -0.94
PCDHA9-201ENST00000378122 NCOA6Q14686 2063 aaPredicted RBP9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 DAZ2Q13117 558 aaKnown RBP9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 NFE4Q86UQ8 179 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 C19orf71A6NCJ1 209 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 H0YGX0 51 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 IGHV4-31P0DP07 118 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 MYCNOSP40205 109 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 GDF5OSQ5U4N7 250 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 NDUFC2O95298 119 aa9.18□□□□□ -0.94
PCDHA9-201ENST00000378122 FAM208BQ5VWN6 2430 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 WFDC9Q8NEX5 89 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 TMEM131Q92545 1883 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 NUP210LQ5VU65 1888 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 CRYGBP07316 175 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 UBE2D1P51668 147 aa9.17□□□□□ -0.94
PCDHA9-201ENST00000378122 LINC00482Q8N8I6 264 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 A0A0J9YWU9 116 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 COX7A2LO14548 114 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
PCDHA9-201ENST00000378122 Q8N7P7 452 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 IGF1P05019 195 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 IGFL2Q6UWQ7 119 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 Q6ZUT4 128 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 A0A1B0GXF2 115 aa9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 LINC00322Q6ZN03 302 aaPredicted RBP9.15□□□□□ -0.94
PCDHA9-201ENST00000378122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.15□□□□□ -0.95
PCDHA9-201ENST00000378122 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.95
PCDHA9-201ENST00000378122 IGKV1D-37A0A075B6S9 117 aa9.15□□□□□ -0.95
PCDHA9-201ENST00000378122 DAZAP2Q15038 168 aaPredicted RBP9.15□□□□□ -0.95
PCDHA9-201ENST00000378122 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.95
PCDHA9-201ENST00000378122 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
PCDHA9-201ENST00000378122 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
PCDHA9-201ENST00000378122 A0A087WZ39 114 aa9.14□□□□□ -0.95
PCDHA9-201ENST00000378122 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
PCDHA9-201ENST00000378122 MDFICQ9P1T7 246 aa9.14□□□□□ -0.95
PCDHA9-201ENST00000378122 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 MED14OSP0DP75 135 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 ZNF80P51504 273 aaPredicted RBP9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 Q6ZPA2 131 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 H3BT86 120 aa9.13□□□□□ -0.95
PCDHA9-201ENST00000378122 YPEL4Q96NS1 127 aa9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 C4orf3Q8WVX3 66 aa9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 NDUFV3P56181 108 aaKnown RBP9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 UNQ9165/PRO28630Q6UXU0 137 aa9.12□□□□□ -0.95
PCDHA9-201ENST00000378122 NREPQ16612 68 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 Q8NA96 180 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 SPINK6Q6UWN8 80 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 IGKV4-1P06312 121 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 P0C879 139 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 P0DMU3 169 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms