RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ELANEP08246 267 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 Q6YL49 198 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 AMELXQ99217 191 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 PRO0461Q9UI25 63 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 USP24Q9UPU5 2620 aa8.05□□□□□ -1.12
BEST1-201ENST00000378043 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 F8W1H4 67 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 NSUN5P1Q3KNT7 163 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 SPANXB1Q9NS25 103 aaPredicted RBP8.04□□□□□ -1.12
BEST1-201ENST00000378043 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
BEST1-201ENST00000378043 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
BEST1-201ENST00000378043 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 BEX4Q9NWD9 120 aaPredicted RBP8.04□□□□□ -1.12
BEST1-201ENST00000378043 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
BEST1-201ENST00000378043 DEFB136Q30KP8 78 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 TCTEX1D4Q5JR98 221 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 TRPT1Q86TN4 253 aaKnown RBP8.03□□□□□ -1.12
BEST1-201ENST00000378043 UBR5O95071 2799 aaPredicted RBP8.03□□□□□ -1.12
BEST1-201ENST00000378043 PRM2P04554 102 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 HERVK_113P61574 105 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 RHOHQ15669 191 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 SH2D6Q7Z4S9 175 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 NAV2Q8IVL1 2488 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 NF1P21359 2839 aa8.03□□□□□ -1.12
BEST1-201ENST00000378043 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.12
BEST1-201ENST00000378043 KNCNA6PVL3 124 aa8.02□□□□□ -1.12
BEST1-201ENST00000378043 SLURP1P55000 103 aa8.02□□□□□ -1.12
BEST1-201ENST00000378043 NFE4Q86UQ8 179 aa8.02□□□□□ -1.12
BEST1-201ENST00000378043 C20orf203Q8NBC4 194 aa8.02□□□□□ -1.12
BEST1-201ENST00000378043 PRRC2AP48634 2157 aaKnown RBP8.02□□□□□ -1.13
BEST1-201ENST00000378043 ETDBQ3ZM63 59 aa8.02□□□□□ -1.13
BEST1-201ENST00000378043 IGHV4-31P0DP07 118 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 PROK1P58294 105 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 SLC25A29Q8N8R3 303 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 MRPL16Q9NX20 251 aaKnown RBP8.01□□□□□ -1.13
BEST1-201ENST00000378043 EPG5Q9HCE0 2579 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 RBMY1BA6NDE4 496 aaKnown RBP8.01□□□□□ -1.13
BEST1-201ENST00000378043 RBMY1EA6NEQ0 496 aaKnown RBP8.01□□□□□ -1.13
BEST1-201ENST00000378043 A6NJY4 79 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 I3L3M4 83 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 J3QQQ9 107 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 TSPAN13O95857 204 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 PRB1P04280 392 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 RBMY1DP0C7P1 496 aaKnown RBP8.01□□□□□ -1.13
BEST1-201ENST00000378043 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 HTN1P15515 57 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 GAGE13Q4V321 117 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 FAM104AQ969W3 186 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 Q9UF83 564 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 CHD6Q8TD26 2715 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 DEFB131AP59861 70 aa8.01□□□□□ -1.13
BEST1-201ENST00000378043 IGLV4-3A0A075B6K6 122 aa8□□□□□ -1.13
BEST1-201ENST00000378043 IGHV3-73A0A0B4J1V6 119 aa8□□□□□ -1.13
BEST1-201ENST00000378043 TMEM223A0PJW6 202 aa8□□□□□ -1.13
BEST1-201ENST00000378043 A8MTW9 85 aa8□□□□□ -1.13
BEST1-201ENST00000378043 APOMO95445 188 aa8□□□□□ -1.13
BEST1-201ENST00000378043 KRTAP10-9P60411 292 aa8□□□□□ -1.13
BEST1-201ENST00000378043 SFTA2Q6UW10 78 aa8□□□□□ -1.13
BEST1-201ENST00000378043 NDUFA11Q86Y39 141 aa8□□□□□ -1.13
BEST1-201ENST00000378043 CCDC168Q8NDH2 2452 aa8□□□□□ -1.13
BEST1-201ENST00000378043 H3BMM0 161 aa8□□□□□ -1.13
BEST1-201ENST00000378043 CFC1BP0CG36 223 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 CFC1P0CG37 223 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
BEST1-201ENST00000378043 UBE2D3P61077 147 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 UBE2D2P62837 147 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 A0A0J9YXV3 536 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 SMCPP49901 116 aaPredicted RBP7.99□□□□□ -1.13
BEST1-201ENST00000378043 HIST2H2BDQ6DRA6 164 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 TMEM61Q8N0U2 210 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 SPAG8Q99932 426 aaPredicted RBP7.99□□□□□ -1.13
BEST1-201ENST00000378043 EDA2RQ9HAV5 297 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
BEST1-201ENST00000378043 APCP25054 2843 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 INSL3P51460 131 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 RHODO00212 210 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 Q6ZSN1 163 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 Q8N2B8 174 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
BEST1-201ENST00000378043 LEPROTO15243 131 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
BEST1-201ENST00000378043 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
BEST1-201ENST00000378043 Q5PR19 223 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
BEST1-201ENST00000378043 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
BEST1-201ENST00000378043 LOC107984156A0A0G2JMH3 177 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 ARL17AQ8IVW1 177 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 VCX2Q9H322 139 aa7.97□□□□□ -1.13
BEST1-201ENST00000378043 DLX4Q92988 240 aaPredicted RBP7.96□□□□□ -1.13
BEST1-201ENST00000378043 TSSC4Q9Y5U2 329 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms