RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 IGHV1OR15-1A0A075B7D0 117 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 A0A0J9YY99 117 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 TMEM238C9JI98 176 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 M0QY20 66 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 P0DMU3 169 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 FAM231AP0DMU4 169 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 FAM231CP0DMU5 169 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 DEFB136Q30KP8 78 aa13.42□□□□□ -0.26
SF1-203ENST00000377387 TMEM238LA0A1B0GVL6 79 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 A6NJY4 79 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 LGALS9O00182 355 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 TSPAN13O95857 204 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 PROK1P58294 105 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
SF1-203ENST00000377387 K7EQG2 157 aa13.4□□□□□ -0.26
SF1-203ENST00000377387 AZU1P20160 251 aa13.4□□□□□ -0.26
SF1-203ENST00000377387 TMEM141Q96I45 108 aa13.4□□□□□ -0.26
SF1-203ENST00000377387 LINC01619G3V211 115 aa13.4□□□□□ -0.27
SF1-203ENST00000377387 PRO0461Q9UI25 63 aa13.4□□□□□ -0.27
SF1-203ENST00000377387 C18orf65Q6ZTR6 163 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 PTH2Q96A98 100 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 DUX3Q96PT4 197 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
SF1-203ENST00000377387 J3QQQ9 107 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 LGALS3P17931 250 aaKnown RBP13.39□□□□□ -0.27
SF1-203ENST00000377387 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
SF1-203ENST00000377387 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 ZNF580Q9UK33 172 aa13.39□□□□□ -0.27
SF1-203ENST00000377387 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
SF1-203ENST00000377387 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
SF1-203ENST00000377387 H7C2G1 150 aa13.38□□□□□ -0.27
SF1-203ENST00000377387 UBE2D1P51668 147 aa13.38□□□□□ -0.27
SF1-203ENST00000377387 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
SF1-203ENST00000377387 NIPBLQ6KC79 2804 aaeCLIP13.38□□□□□ -0.27
SF1-203ENST00000377387 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
SF1-203ENST00000377387 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
SF1-203ENST00000377387 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
SF1-203ENST00000377387 J3QR89 54 aa13.37□□□□□ -0.27
SF1-203ENST00000377387 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
SF1-203ENST00000377387 Q9UF83 564 aa13.37□□□□□ -0.27
SF1-203ENST00000377387 ADARB2-AS1A8MUL3 147 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
SF1-203ENST00000377387 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
SF1-203ENST00000377387 NDUFA11Q86Y39 141 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 DLX4Q92988 240 aaPredicted RBP13.36□□□□□ -0.27
SF1-203ENST00000377387 BBC3Q96PG8 261 aaPredicted RBP13.36□□□□□ -0.27
SF1-203ENST00000377387 SIGMAR1Q99720 223 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 ACANP16112 2415 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 TCTEX1D4Q5JR98 221 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
SF1-203ENST00000377387 RAX2Q96IS3 184 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 CHD6Q8TD26 2715 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 CFC1BP0CG36 223 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 CFC1P0CG37 223 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 SLURP1P55000 103 aa13.36□□□□□ -0.27
SF1-203ENST00000377387 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
SF1-203ENST00000377387 APCP25054 2843 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 TRAV2A0A0B4J234 112 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 SCGB1C2P0DMR2 95 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 SMCPP49901 116 aaPredicted RBP13.35□□□□□ -0.27
SF1-203ENST00000377387 DEFB131AP59861 70 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 IGHV3-30P01768 117 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 KRTAP10-9P60411 292 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 LINC01356Q8N9X3 169 aa13.35□□□□□ -0.27
SF1-203ENST00000377387 KHDC1LQ5JSQ8 128 aa13.34□□□□□ -0.27
SF1-203ENST00000377387 SPXQ9BT56 116 aa13.34□□□□□ -0.27
SF1-203ENST00000377387 VCX2Q9H322 139 aa13.34□□□□□ -0.27
SF1-203ENST00000377387 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
SF1-203ENST00000377387 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.27
SF1-203ENST00000377387 MTORP42345 2549 aa13.33□□□□□ -0.27
SF1-203ENST00000377387 I3L3M4 83 aa13.33□□□□□ -0.28
SF1-203ENST00000377387 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
SF1-203ENST00000377387 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
SF1-203ENST00000377387 AMELXQ99217 191 aa13.32□□□□□ -0.28
SF1-203ENST00000377387 TCL1BO95988 128 aa13.32□□□□□ -0.28
SF1-203ENST00000377387 A4D1N5 150 aa13.31□□□□□ -0.28
SF1-203ENST00000377387 ZNF22P17026 224 aaPredicted RBP13.31□□□□□ -0.28
SF1-203ENST00000377387 IGLV4-3A0A075B6K6 122 aa13.31□□□□□ -0.28
SF1-203ENST00000377387 NSUN5P1Q3KNT7 163 aa13.31□□□□□ -0.28
SF1-203ENST00000377387 NFE4Q86UQ8 179 aa13.31□□□□□ -0.28
SF1-203ENST00000377387 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
SF1-203ENST00000377387 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 CD28P10747 220 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 GATA3P23771 443 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 RHOHQ15669 191 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 VPREB3Q9UKI3 123 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 ITPR3Q14573 2671 aa13.3□□□□□ -0.28
SF1-203ENST00000377387 RHODO00212 210 aa13.29□□□□□ -0.28
SF1-203ENST00000377387 TRGV11A0A075B6L2 103 aa13.29□□□□□ -0.28
SF1-203ENST00000377387 TRAV8-3A0A0A6YYJ7 113 aa13.29□□□□□ -0.28
SF1-203ENST00000377387 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
SF1-203ENST00000377387 FLNAP21333 2647 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms