RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 UBE2D3P61077 147 aa6.18□□□□□ -1.42
C9orf85-202ENST00000377027 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
C9orf85-202ENST00000377027 UBE2D2P62837 147 aa6.18□□□□□ -1.42
C9orf85-202ENST00000377027 ENHOQ6UWT2 76 aa6.18□□□□□ -1.42
C9orf85-202ENST00000377027 DAZAP1Q96EP5 407 aaKnown RBP6.18□□□□□ -1.42
C9orf85-202ENST00000377027 CHAC1Q9BUX1 264 aa6.18□□□□□ -1.42
C9orf85-202ENST00000377027 MED28Q9H204 178 aa6.18□□□□□ -1.42
C9orf85-202ENST00000377027 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 A0A087WWC5 75 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 FXYD6-FXYD2A0A087WZ82 144 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 M0R381 172 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 RHODO00212 210 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 PTTG1O95997 202 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 IFNA7P01567 189 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 RPL19P84098 196 aaKnown RBP6.17□□□□□ -1.42
C9orf85-202ENST00000377027 OR11H4Q8NGC9 324 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 UBE2WQ96B02 151 aa6.17□□□□□ -1.42
C9orf85-202ENST00000377027 LRP2P98164 4655 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 TRBV6-1A0A0K0K1D8 114 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 MAP1LC3B2A6NCE7 125 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 PANO1I0J062 215 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 MPV17L2Q567V2 206 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 FAM162BQ5T6X4 162 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 PRR27Q6MZM9 219 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 KRTAP26-1Q6PEX3 210 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 NTM-AS1Q6ZSK4 140 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 NEXN-AS1Q8NBZ9 246 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 OR10G8Q8NGN5 311 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 OR10AG1Q8NH19 301 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 DEFB104AQ8WTQ1 72 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 FMC1Q96HJ9 113 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 MAP1LC3BQ9GZQ8 125 aa6.16□□□□□ -1.42
C9orf85-202ENST00000377027 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 RBFOX3A6NFN3 312 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 Q8N976 141 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 CHCHD7Q9BUK0 85 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 ZFP30Q9Y2G7 519 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 PHLDA3Q9Y5J5 127 aa6.15□□□□□ -1.42
C9orf85-202ENST00000377027 TRBV7-3A0A075B6L6 115 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 TRBV6-8A0A0A6YYG3 113 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 SMLR1H3BR10 107 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 SNAI2O43623 268 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 TPT1P13693 172 aaKnown RBP6.14□□□□□ -1.43
C9orf85-202ENST00000377027 ZFP82Q8N141 532 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 INO80EQ8NBZ0 244 aaPredicted RBP6.14□□□□□ -1.43
C9orf85-202ENST00000377027 KIF25-AS1Q9Y6Z4 181 aa6.14□□□□□ -1.43
C9orf85-202ENST00000377027 BORCS7-ASMTA0A0B4J1R7 106 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 MUC21A0A0G2JKD1 596 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 MUC21A0A140T8X8 626 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 PAGE4O60829 102 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 IGLV2-8P01709 118 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 PRSS1P07477 247 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 UBE2G1P62253 170 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 RPL36AP83881 106 aaKnown RBP6.13□□□□□ -1.43
C9orf85-202ENST00000377027 AKR1C8PQ5T2L2 129 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 C15orf54Q8N8G6 183 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 RPL36ALQ969Q0 106 aaKnown RBP6.13□□□□□ -1.43
C9orf85-202ENST00000377027 RMI2Q96E14 147 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 NKX6-2Q9C056 277 aaPredicted RBP6.13□□□□□ -1.43
C9orf85-202ENST00000377027 URGCP-MRPS24S4R325 110 aa6.13□□□□□ -1.43
C9orf85-202ENST00000377027 A0A087WX48 190 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 USP17L23D6RBM5 183 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 ARPC5O15511 151 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 AKR1C3P42330 323 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 RAB4BP61018 213 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 PRR34Q9NV39 138 aa6.12□□□□□ -1.43
C9orf85-202ENST00000377027 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 CXCL1P09341 107 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 ZNF56Q15929 161 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 CLPSL2Q6UWE3 100 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 VAX2Q9UIW0 290 aa6.11□□□□□ -1.43
C9orf85-202ENST00000377027 A0A1B0GV50 99 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 OXTP01178 125 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 OR5AL1P0C617 328 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 Q0VG73 95 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 ELOBQ15370 118 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 MBD3L1Q8WWY6 194 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 TCEAL7Q9BRU2 100 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 DERL1Q9BUN8 251 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 ZNF471Q9BX82 626 aaPredicted RBP6.1□□□□□ -1.43
C9orf85-202ENST00000377027 GFRA4Q9GZZ7 299 aa6.1□□□□□ -1.43
C9orf85-202ENST00000377027 TMEM262E9PQX1 116 aa6.09□□□□□ -1.43
C9orf85-202ENST00000377027 ANGP03950 147 aaKnown RBP6.09□□□□□ -1.43
C9orf85-202ENST00000377027 SEC11BP0C7V7 166 aa6.09□□□□□ -1.43
C9orf85-202ENST00000377027 RBX1P62877 108 aa6.09□□□□□ -1.43
C9orf85-202ENST00000377027 KCNRGQ8N5I3 272 aa6.09□□□□□ -1.43
C9orf85-202ENST00000377027 C9orf163Q8N9P6 203 aa6.09□□□□□ -1.43
C9orf85-202ENST00000377027 IGLC6P0CF74 106 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 GZMBP10144 247 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 SSTP61278 116 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
C9orf85-202ENST00000377027 CCL20P78556 96 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 GAGE6Q13070 117 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 MIAQ16674 131 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms