RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ZNF688P0C7X2 276 aa8.63□□□□□ -1.03
TM9SF2-201ENST00000376387 SBSPONQ8IVN8 264 aa8.63□□□□□ -1.03
TM9SF2-201ENST00000376387 BEX4Q9NWD9 120 aaPredicted RBP8.63□□□□□ -1.03
TM9SF2-201ENST00000376387 A0A087WWL8 130 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 ELANEP08246 267 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 LINC00315P59091 139 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 TMEM219Q86XT9 240 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 HERVK_113P63121 156 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 CEP295Q9C0D2 2601 aa8.62□□□□□ -1.03
TM9SF2-201ENST00000376387 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 C11orf45Q8TAV5 145 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 KIF25-AS1Q9Y6Z4 181 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 PMVKQ15126 192 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 MINOS1Q5TGZ0 78 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
TM9SF2-201ENST00000376387 SAA4P35542 130 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 PRO1854Q9UHT4 67 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 AKAP6Q13023 2319 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 SRD5A1P18405 259 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 FOXC1Q12948 553 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 C9orf139Q6ZV77 190 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 ZNF580Q9UK33 172 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 TRBV7-1A0A0A6YYK4 115 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 SOCS3O14543 225 aa8.6□□□□□ -1.03
TM9SF2-201ENST00000376387 CRYBG3Q68DQ2 2970 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 SLC25A20O43772 301 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 CRLF1O75462 422 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 HERVK_113P61574 105 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 CHCHD5Q9BSY4 110 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 MAP1AP78559 2803 aaPredicted RBP8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 J3QQQ9 107 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
TM9SF2-201ENST00000376387 IGHV3OR16-10A0A075B7F0 116 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 SPTA1P02549 2419 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 F5H697 171 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 LENEPQ9Y5L5 61 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 PTPRZ1P23471 2315 aaPredicted RBP8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 LINC01587Q99440 93 aa8.58□□□□□ -1.04
TM9SF2-201ENST00000376387 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 CCL21O00585 134 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 SNCGO76070 127 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 IGHV3-11P01762 117 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 C11orf71Q6IPW1 123 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 IGHV3-33P01772 117 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 C5orf56Q8N8D9 126 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 SDHAF1A6NFY7 115 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
TM9SF2-201ENST00000376387 IGHV1-69DA0A0B4J2H0 117 aa8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 OVOL1O14753 267 aa8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 LINC00482Q8N8I6 264 aa8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 IGHV4-39P01824 125 aa8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
TM9SF2-201ENST00000376387 IGHV4OR15-8A0A075B7B6 117 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 A0A087WW49 117 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 ADARB2-AS1A8MUL3 147 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 TRAV41A0A0B4J266 112 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 UBE2E1P51965 193 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 VCYO14598 125 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 NXPH4O95158 308 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 PAPPA-AS1Q5QFB9 102 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
TM9SF2-201ENST00000376387 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 ATRXP46100 2492 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 Q8N1Y9 231 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 K7ENP7 123 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 PPP1R17O96001 155 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 SPTAN1Q13813 2472 aaKnown RBP8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 DSCR8Q96T75 97 aa8.54□□□□□ -1.04
TM9SF2-201ENST00000376387 P0DMU3 169 aa8.53□□□□□ -1.04
TM9SF2-201ENST00000376387 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
TM9SF2-201ENST00000376387 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
TM9SF2-201ENST00000376387 Q6ZSV7 163 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms