RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 APRG1Q8IVJ8 170 aa10.83□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TOMM6Q96B49 74 aa10.83□□□□□ -0.68
TNFRSF1B-201ENST00000376259 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
TNFRSF1B-201ENST00000376259 B4DSR2 109 aa10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 RNASE3P12724 160 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 A8MZ25 164 aa10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 PRB1P04280 392 aa10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TRPT1Q86TN4 253 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1B-201ENST00000376259 E9PLD3 99 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 SLURP1P55000 103 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 NEXN-AS1Q8NBZ9 246 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TIMM21Q9BVV7 248 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
TNFRSF1B-201ENST00000376259 FASNP49327 2511 aaKnown RBP10.8□□□□□ -0.68
TNFRSF1B-201ENST00000376259 COX6CP09669 75 aa10.8□□□□□ -0.68
TNFRSF1B-201ENST00000376259 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TRGV1A0A0A0MS02 117 aa10.8□□□□□ -0.68
TNFRSF1B-201ENST00000376259 AVPP01185 164 aa10.8□□□□□ -0.68
TNFRSF1B-201ENST00000376259 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 SPANXB1Q9NS25 103 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 MUSTN1Q8IVN3 82 aa10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TSPAN13O95857 204 aa10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 HOXD3P31249 432 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1B-201ENST00000376259 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 IGHV4OR15-8A0A075B7B6 117 aa10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 A0A087WW49 117 aa10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 SNCGO76070 127 aa10.78□□□□□ -0.68
TNFRSF1B-201ENST00000376259 TAL2Q16559 108 aa10.77□□□□□ -0.68
TNFRSF1B-201ENST00000376259 IGHG2P01859 326 aa10.77□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TTC32Q5I0X7 151 aa10.77□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TCL1BO95988 128 aa10.77□□□□□ -0.69
TNFRSF1B-201ENST00000376259 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
TNFRSF1B-201ENST00000376259 I3L3M4 83 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 SLC25A20O43772 301 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 COX6B1P14854 86 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 ANAPC13Q9BS18 74 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
TNFRSF1B-201ENST00000376259 HRNRQ86YZ3 2850 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TRAV12-1A0A0B4J245 112 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 M0R2P5 195 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 RPL35AP18077 110 aaKnown RBP10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 FOXI1Q12951 378 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C2orf82Q6UX34 121 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C10orf105Q8TEF2 133 aa10.75□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C19orf54Q5BKX5 351 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 NDUFA11Q86Y39 141 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 A0A0J9YY99 117 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 UBE2L6O14933 153 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TSPEAR-AS2P59090 65 aa10.74□□□□□ -0.69
TNFRSF1B-201ENST00000376259 ANKRD29Q8N6D5 301 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 CHD6Q8TD26 2715 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 MUC4Q99102 2169 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 GAGE12JA6NER3 117 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 GAGE4Q13068 117 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 GAGE5Q13069 117 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 STHQ8IWL8 128 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 PIFOQ8TCI5 191 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 ZMAT4Q9H898 229 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 CFC1P0CG37 223 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 CIRBPQ14011 172 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
TNFRSF1B-201ENST00000376259 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
TNFRSF1B-201ENST00000376259 Q6ZSV7 163 aa10.72□□□□□ -0.69
TNFRSF1B-201ENST00000376259 MORN3Q6PF18 240 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1B-201ENST00000376259 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
TNFRSF1B-201ENST00000376259 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
TNFRSF1B-201ENST00000376259 A0A0J9YX75 114 aa10.71□□□□□ -0.69
TNFRSF1B-201ENST00000376259 A6NDX4 124 aa10.71□□□□□ -0.69
TNFRSF1B-201ENST00000376259 TMEM262E9PQX1 116 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 RS1O15537 224 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE2BQ13066 116 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE2EQ4V326 116 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CLEC2BQ92478 149 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TMEM61Q8N0U2 210 aa10.7□□□□□ -0.7
TNFRSF1B-201ENST00000376259 U3KQE9 123 aa10.7□□□□□ -0.7
TNFRSF1B-201ENST00000376259 PRIMA1Q86XR5 153 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms