RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
MSH5-202ENST00000375740 KLHL30-AS1Q8NEE0 82 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 RASL10AQ92737 203 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 APCP25054 2843 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 MUC4Q99102 2169 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 TCL1BO95988 128 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 MGPP08493 103 aa10.38□□□□□ -0.75
MSH5-202ENST00000375740 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 F8VRH5 84 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 CD7P09564 240 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 PPDPFLQ8WWR9 84 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
MSH5-202ENST00000375740 ODF3Q96PU9 254 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 SMIM2Q9BVW6 85 aa10.37□□□□□ -0.75
MSH5-202ENST00000375740 PLNP26678 52 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 H7C1H1 209 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 UBE2D1P51668 147 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 UBE2D3P61077 147 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 UBE2D2P62837 147 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 GAGE5Q13069 117 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 GAGE6Q13070 117 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
MSH5-202ENST00000375740 NXPH4O95158 308 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
MSH5-202ENST00000375740 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
MSH5-202ENST00000375740 DUX3Q96PT4 197 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 SPINK13Q1W4C9 94 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 JPT2Q9H910 190 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
MSH5-202ENST00000375740 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 LINC01619G3V211 115 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 LINC00315P59091 139 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
MSH5-202ENST00000375740 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
MSH5-202ENST00000375740 KHDC1LQ5JSQ8 128 aa10.33□□□□□ -0.76
MSH5-202ENST00000375740 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
MSH5-202ENST00000375740 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
MSH5-202ENST00000375740 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
MSH5-202ENST00000375740 TEX29Q8N6K0 151 aa10.33□□□□□ -0.76
MSH5-202ENST00000375740 SORL1Q92673 2214 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 CRLF1O75462 422 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 C4orf3Q8WVX3 66 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 EMP1P54849 157 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 Q6ZSV7 163 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 NDUFA11Q86Y39 141 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 TMEM86BQ8N661 226 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 CITED1Q99966 193 aa10.32□□□□□ -0.76
MSH5-202ENST00000375740 A0A087WWL8 130 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 Q8N1Y9 231 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 A8MWV9 139 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 ORMDL2Q53FV1 153 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
MSH5-202ENST00000375740 DEFB131AP59861 70 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 PEMTQ9UBM1 199 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 ZNF469Q96JG9 3925 aaPredicted RBP10.3□□□□□ -0.76
MSH5-202ENST00000375740 DNAJC9-AS1A6NH13 148 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 PPP1R17O96001 155 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 HERV-K104P63124 156 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 TENM4Q6N022 2769 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 A6NJY4 79 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 CFC1P0CG37 223 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
MSH5-202ENST00000375740 F5H697 171 aa10.29□□□□□ -0.76
MSH5-202ENST00000375740 TMEM61Q8N0U2 210 aa10.29□□□□□ -0.76
MSH5-202ENST00000375740 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
MSH5-202ENST00000375740 TRPT1Q86TN4 253 aaKnown RBP10.29□□□□□ -0.76
MSH5-202ENST00000375740 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 ESM1Q9NQ30 184 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 NBPF19A0A087WUL8 3843 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 A0A0J9YY99 117 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 PLA2G2AP14555 144 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 FAM74A4Q5TZK3 123 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
MSH5-202ENST00000375740 TLN2Q9Y4G6 2542 aa10.27□□□□□ -0.76
MSH5-202ENST00000375740 RHODO00212 210 aa10.27□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
MSH5-202ENST00000375740 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms