RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
HDAC8-202ENST00000373556 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
HDAC8-202ENST00000373556 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
HDAC8-202ENST00000373556 RGS21Q2M5E4 152 aa10.47□□□□□ -0.73
HDAC8-202ENST00000373556 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
HDAC8-202ENST00000373556 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-202ENST00000373556 HMCN2Q8NDA2 5059 aa10.47□□□□□ -0.73
HDAC8-202ENST00000373556 PKHD1L1Q86WI1 4243 aa10.46□□□□□ -0.73
HDAC8-202ENST00000373556 OR5AL1P0C617 328 aa10.46□□□□□ -0.73
HDAC8-202ENST00000373556 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
HDAC8-202ENST00000373556 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.46□□□□□ -0.73
HDAC8-202ENST00000373556 UMAD1C9J7I0 102 aa10.45□□□□□ -0.74
HDAC8-202ENST00000373556 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
HDAC8-202ENST00000373556 ZNF345Q14585 488 aa10.45□□□□□ -0.74
HDAC8-202ENST00000373556 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
HDAC8-202ENST00000373556 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
HDAC8-202ENST00000373556 PRSS1P07477 247 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 SMIM17P0DL12 118 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 GAGE6Q13070 117 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 MIAQ16674 131 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 DERL1Q9BUN8 251 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 VAX2Q9UIW0 290 aa10.44□□□□□ -0.74
HDAC8-202ENST00000373556 GZMBP10144 247 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 RPL35P42766 123 aaKnown RBP10.43□□□□□ -0.74
HDAC8-202ENST00000373556 PKIAP61925 76 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 RBX1P62877 108 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 AP1S3Q96PC3 154 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
HDAC8-202ENST00000373556 BCL2L11O43521 198 aa10.42□□□□□ -0.74
HDAC8-202ENST00000373556 MGPP08493 103 aa10.42□□□□□ -0.74
HDAC8-202ENST00000373556 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
HDAC8-202ENST00000373556 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
HDAC8-202ENST00000373556 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
HDAC8-202ENST00000373556 KANTRA0A1W2PQU2 76 aa10.41□□□□□ -0.74
HDAC8-202ENST00000373556 CCL20P78556 96 aa10.41□□□□□ -0.74
HDAC8-202ENST00000373556 KRTAP26-1Q6PEX3 210 aa10.41□□□□□ -0.74
HDAC8-202ENST00000373556 A0A0D9SG52 128 aa10.4□□□□□ -0.74
HDAC8-202ENST00000373556 HMSDA8MTL9 139 aa10.4□□□□□ -0.74
HDAC8-202ENST00000373556 RPL37AP61513 92 aaKnown RBP10.4□□□□□ -0.74
HDAC8-202ENST00000373556 GNG13Q9P2W3 67 aa10.4□□□□□ -0.74
HDAC8-202ENST00000373556 IGLV10-54A0A075B6I4 117 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 IGHV1-24A0A0C4DH33 117 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 M0QY20 66 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 OXTP01178 125 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 CENPWQ5EE01 88 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 SUMO4Q6EEV6 95 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 C9orf163Q8N9P6 203 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
HDAC8-202ENST00000373556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
HDAC8-202ENST00000373556 UBR4Q5T4S7 5183 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 PANO1I0J062 215 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
HDAC8-202ENST00000373556 OR2D3Q8NGH3 330 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
HDAC8-202ENST00000373556 RAB19A4D1S5 217 aa10.37□□□□□ -0.75
HDAC8-202ENST00000373556 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
HDAC8-202ENST00000373556 REG3AQ06141 175 aa10.37□□□□□ -0.75
HDAC8-202ENST00000373556 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
HDAC8-202ENST00000373556 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
HDAC8-202ENST00000373556 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
HDAC8-202ENST00000373556 H7C1H1 209 aa10.36□□□□□ -0.75
HDAC8-202ENST00000373556 EIF5AP63241 154 aaKnown RBP10.36□□□□□ -0.75
HDAC8-202ENST00000373556 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
HDAC8-202ENST00000373556 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
HDAC8-202ENST00000373556 CACNG7P62955 275 aa10.35□□□□□ -0.75
HDAC8-202ENST00000373556 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
HDAC8-202ENST00000373556 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
HDAC8-202ENST00000373556 IGLV4-60A0A075B6I1 120 aa10.34□□□□□ -0.75
HDAC8-202ENST00000373556 GNG4P50150 75 aa10.34□□□□□ -0.75
HDAC8-202ENST00000373556 RAB5CP51148 216 aa10.34□□□□□ -0.75
HDAC8-202ENST00000373556 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
HDAC8-202ENST00000373556 TRAV1-1A0A0B4J248 108 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 P01737 135 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 RASL11AQ6T310 242 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
HDAC8-202ENST00000373556 TRBV20OR9-2A0A075B6H5 130 aa10.32□□□□□ -0.76
HDAC8-202ENST00000373556 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 A0A1B0GUV1 79 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 XKRY2A2RUG3 117 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 F2Z2F3 143 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 IFNA1P01562 189 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 NTF3P20783 257 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
HDAC8-202ENST00000373556 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
HDAC8-202ENST00000373556 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 NIT2Q9NQR4 276 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
HDAC8-202ENST00000373556 SLPIP03973 132 aa10.3□□□□□ -0.76
HDAC8-202ENST00000373556 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
HDAC8-202ENST00000373556 PGLYRP4Q96LB8 373 aa10.3□□□□□ -0.76
HDAC8-202ENST00000373556 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms