RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 A0A087WW49 117 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 FANCD2OSQ96PS1 177 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 IMUPQ9GZP8 106 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 NDUFA7O95182 113 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 GPHB5Q86YW7 130 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 GDF5OSQ5U4N7 250 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 ADAMTS9Q9P2N4 1935 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 A0A0J9YY99 117 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 HIST2H2BDQ6DRA6 164 aa10.85□□□□□ -0.67
LMX1B-202ENST00000373474 COX7BP24311 80 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 MIR7-3HGQ8N6C7 128 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 WISP2O76076 250 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
LMX1B-202ENST00000373474 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
LMX1B-202ENST00000373474 DEFB113Q30KQ7 82 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 GYPEP15421 78 aa10.84□□□□□ -0.67
LMX1B-202ENST00000373474 C1orf229Q6ZS94 237 aaPredicted RBP10.84□□□□□ -0.67
LMX1B-202ENST00000373474 DAZAP2Q15038 168 aaPredicted RBP10.83□□□□□ -0.68
LMX1B-202ENST00000373474 TRBV7-3A0A075B6L6 115 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 TM2D2Q9BX73 214 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 MDFICQ9P1T7 246 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 LYRM9A8MSI8 78 aa10.83□□□□□ -0.68
LMX1B-202ENST00000373474 MUC22E2RYF6 1773 aaPredicted RBP10.83□□□□□ -0.68
LMX1B-202ENST00000373474 ODF3BA8MYP8 253 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 Q9HAA7 133 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 H0Y9J4 135 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 UBE2AP49459 152 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 LOXL1Q08397 574 aaPredicted RBP10.82□□□□□ -0.68
LMX1B-202ENST00000373474 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 SERP2Q8N6R1 65 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 SPTA1P02549 2419 aa10.82□□□□□ -0.68
LMX1B-202ENST00000373474 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 IGKV4-1P06312 121 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 P0DMU3 169 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 FAM231AP0DMU4 169 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 FAM231CP0DMU5 169 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
LMX1B-202ENST00000373474 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 TEX49A0A1B0GTD5 131 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 RBX1P62877 108 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 FBXL19-AS1Q494R0 122 aa10.81□□□□□ -0.68
LMX1B-202ENST00000373474 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 OXLD1Q5BKU9 147 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 DEFB1P60022 68 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 MBD6Q96DN6 1003 aa10.8□□□□□ -0.68
LMX1B-202ENST00000373474 A0A0J9YXY3 114 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 C9orf66Q5T8R8 295 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 A6NDX4 124 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 APC2O95996 2303 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 IGLV10-54A0A075B6I4 117 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 J3QKU1 62 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 CASC2Q6XLA1 102 aa10.79□□□□□ -0.68
LMX1B-202ENST00000373474 A0A0J9YX75 114 aa10.78□□□□□ -0.68
LMX1B-202ENST00000373474 ENHOQ6UWT2 76 aa10.77□□□□□ -0.68
LMX1B-202ENST00000373474 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
LMX1B-202ENST00000373474 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
LMX1B-202ENST00000373474 Q8NA96 180 aa10.77□□□□□ -0.69
LMX1B-202ENST00000373474 ZMAT4Q9H898 229 aa10.76□□□□□ -0.69
LMX1B-202ENST00000373474 COX7CP15954 63 aa10.76□□□□□ -0.69
LMX1B-202ENST00000373474 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
LMX1B-202ENST00000373474 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
LMX1B-202ENST00000373474 C4orf48Q5BLP8 95 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 DOCK7Q96N67 2140 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 IGHV3-30P01768 117 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 IGHV3-33P01772 117 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 IGHV3-30-5P0DP03 117 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 ODF3Q96PU9 254 aa10.75□□□□□ -0.69
LMX1B-202ENST00000373474 TIMM17BO60830 172 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 FSTL3O95633 263 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 CEP250Q9BV73 2442 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 CCL18P55774 89 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 B9D2Q9BPU9 175 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 U3KQK5 164 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 UFSP1Q6NVU6 142 aa10.74□□□□□ -0.69
LMX1B-202ENST00000373474 TRBV10-1A0A0K0K1A3 114 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 A6NED7 52 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 TNRC6BQ9UPQ9 1833 aaKnown RBP10.73□□□□□ -0.69
LMX1B-202ENST00000373474 ARFGEF3Q5TH69 2177 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 MYCNOSP40205 109 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 SHANK1Q9Y566 2161 aa10.73□□□□□ -0.69
LMX1B-202ENST00000373474 DYSFO75923 2080 aa10.72□□□□□ -0.69
LMX1B-202ENST00000373474 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
LMX1B-202ENST00000373474 NRGNQ92686 78 aa10.72□□□□□ -0.69
LMX1B-202ENST00000373474 TMEM263Q8WUH6 116 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms