RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 C19orf73Q9NVV2 129 aa4.06□□□□□ -1.76
ATG4A-204ENST00000372246 TRAV8-3A0A0A6YYJ7 113 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE12JA6NER3 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 H3BS24 57 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE7O76087 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 P0DMU3 169 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 FAM231AP0DMU4 169 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 FAM231CP0DMU5 169 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 HTN1P15515 57 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE4Q13068 117 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 C10orf126Q8N4M7 172 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 NPBQ8NG41 125 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 CHCHD5Q9BSY4 110 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 ITPR1Q14643 2758 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 TRAV12-1A0A0B4J245 112 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 A0A0J9YXV3 536 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 RS1O15537 224 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 PRSS2P07478 247 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
ATG4A-204ENST00000372246 PROK1P58294 105 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 PIP4P1Q86T03 277 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 Q8NA96 180 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 ODF3Q96PU9 254 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 UBTD1Q9HAC8 227 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 CENPEQ02224 2701 aa4.05□□□□□ -1.76
ATG4A-204ENST00000372246 TRAV12-3A0A0B4J271 114 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 J3QQQ9 107 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
ATG4A-204ENST00000372246 LY6DQ14210 128 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 SUMO4Q6EEV6 95 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 FBN2P35556 2912 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 IGIPA6NJ69 53 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 TRIAP1O43715 76 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 IGHV3-33P01772 117 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 ASIPP42127 132 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 LINC00315P59091 139 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 BRD3OSQ6XYD6 125 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 SLC25A29Q8N8R3 303 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 EEF1AKMT3Q96AZ1 226 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 SLC50A1Q9BRV3 221 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 DPH3P1Q9H4G8 78 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 MDFICQ9P1T7 246 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 KLK9Q9UKQ9 250 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
ATG4A-204ENST00000372246 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 SNCGO76070 127 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 CD3EP07766 207 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 LY6EQ16553 131 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 CSPG4Q6UVK1 2322 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 ZNF625Q96I27 306 aaPredicted RBP4.03□□□□□ -1.76
ATG4A-204ENST00000372246 A0A1B0GX51 115 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 A0A1W2PPR1 153 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 ODF3BA8MYP8 253 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 LGALS3P17931 250 aaKnown RBP4.03□□□□□ -1.76
ATG4A-204ENST00000372246 SAA4P35542 130 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 UBE2E1P51965 193 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 LY6G5BQ8NDX9 201 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 ATP6V0E2Q8NHE4 81 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 TMEM263Q8WUH6 116 aaKnown RBP4.03□□□□□ -1.76
ATG4A-204ENST00000372246 TIMD4Q96H15 378 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 NCOR2Q9Y618 2525 aa4.03□□□□□ -1.76
ATG4A-204ENST00000372246 NBPF19A0A087WUL8 3843 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 KNCNA6PVL3 124 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 RHODO00212 210 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 CCL21O00585 134 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 PMVKQ15126 192 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 ZNF56Q15929 161 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 Q8N6K4 173 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 METTL26Q96S19 204 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 KLK5Q9Y337 293 aaPredicted RBP4.02□□□□□ -1.77
ATG4A-204ENST00000372246 PTPRQQ9UMZ3 2332 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 SRSF2Q01130 221 aaKnown RBP4.02□□□□□ -1.77
ATG4A-204ENST00000372246 LINC01620Q4KN68 170 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 C10orf99Q6UWK7 81 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 SBSPONQ8IVN8 264 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 KIF25-AS1Q9Y6Z4 181 aa4.02□□□□□ -1.77
ATG4A-204ENST00000372246 IGHV4-4A0A075B6R2 117 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 IFITM1P13164 125 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
ATG4A-204ENST00000372246 OR13C6PQ8NH95 151 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 ITLN2Q8WWU7 325 aaPredicted RBP4.01□□□□□ -1.77
ATG4A-204ENST00000372246 RNF5Q99942 180 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 POLQO75417 2590 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 TRAV8-4A0A0B4J246 113 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 H7C423 109 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 HERVK_113P61574 105 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
ATG4A-204ENST00000372246 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 IGFL3Q6UXB1 125 aa4.01□□□□□ -1.77
ATG4A-204ENST00000372246 OR10J6PQ8NGY7 276 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms