RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.24
VEGFA-206ENST00000372077 AP1S3Q96PC3 154 aa13.52□□□□□ -0.24
VEGFA-206ENST00000372077 SIGMAR1Q99720 223 aa13.52□□□□□ -0.24
VEGFA-206ENST00000372077 WFDC10AQ9H1F0 79 aa13.52□□□□□ -0.25
VEGFA-206ENST00000372077 MGPP08493 103 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 STHQ8IWL8 128 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 U3KQK5 164 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 FCER1GP30273 86 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 EMP1P54849 157 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 OXLD1Q5BKU9 147 aa13.51□□□□□ -0.25
VEGFA-206ENST00000372077 C14orf178Q8N769 122 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-206ENST00000372077 A0A1B0GW15 77 aa13.5□□□□□ -0.25
VEGFA-206ENST00000372077 GNRH2O43555 120 aa13.5□□□□□ -0.25
VEGFA-206ENST00000372077 RNASE4P34096 147 aaKnown RBP13.5□□□□□ -0.25
VEGFA-206ENST00000372077 SPINK13Q1W4C9 94 aa13.5□□□□□ -0.25
VEGFA-206ENST00000372077 RPL39LQ96EH5 51 aaKnown RBP13.5□□□□□ -0.25
VEGFA-206ENST00000372077 MTURNQ8N3F0 131 aa13.5□□□□□ -0.25
VEGFA-206ENST00000372077 ANK2Q01484 3957 aa13.5□□□□□ -0.25
VEGFA-206ENST00000372077 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
VEGFA-206ENST00000372077 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
VEGFA-206ENST00000372077 S100A4P26447 101 aaKnown RBP13.49□□□□□ -0.25
VEGFA-206ENST00000372077 Q8N1Y9 231 aa13.49□□□□□ -0.25
VEGFA-206ENST00000372077 LINC01559Q495D7 138 aa13.49□□□□□ -0.25
VEGFA-206ENST00000372077 MRPL35Q9NZE8 188 aaKnown RBP13.49□□□□□ -0.25
VEGFA-206ENST00000372077 SMIM17P0DL12 118 aa13.48□□□□□ -0.25
VEGFA-206ENST00000372077 EGFEM1PQ0D2K5 195 aa13.48□□□□□ -0.25
VEGFA-206ENST00000372077 JPT2Q9H910 190 aa13.48□□□□□ -0.25
VEGFA-206ENST00000372077 NACAE9PAV3 2078 aa13.48□□□□□ -0.25
VEGFA-206ENST00000372077 FXYD2P54710 66 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 SFTA2Q6UW10 78 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 GTF2H5Q6ZYL4 71 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 CMYA5Q8N3K9 4069 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 TRAV12-2A0A075B6T6 113 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 C9orf118A6NHY6 69 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 ODF1Q14990 250 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 UFSP1Q6NVU6 142 aa13.47□□□□□ -0.25
VEGFA-206ENST00000372077 BOD1L2Q8IYS8 172 aa13.46□□□□□ -0.25
VEGFA-206ENST00000372077 SEC11AP67812 179 aa13.46□□□□□ -0.25
VEGFA-206ENST00000372077 GATD1Q8NB37 220 aa13.46□□□□□ -0.25
VEGFA-206ENST00000372077 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
VEGFA-206ENST00000372077 MAPKAPK5-AS1Q8N8E1 139 aa13.45□□□□□ -0.26
VEGFA-206ENST00000372077 KRTAP10-11P60412 298 aa13.45□□□□□ -0.26
VEGFA-206ENST00000372077 ZNF479Q96JC4 524 aa13.45□□□□□ -0.26
VEGFA-206ENST00000372077 SAMD5Q5TGI4 173 aa13.44□□□□□ -0.26
VEGFA-206ENST00000372077 NHP2Q9NX24 153 aaKnown RBP13.44□□□□□ -0.26
VEGFA-206ENST00000372077 A6NDN8 102 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 H3BRM9 83 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 ANXA2RQ3ZCQ2 193 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 HHLA3Q9XRX5 114 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 SPCS1Q9Y6A9 102 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 IGKCP01834 107 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 RBMY1A1P0DJD3 496 aaKnown RBP13.43□□□□□ -0.26
VEGFA-206ENST00000372077 RBMY1CP0DJD4 496 aa13.43□□□□□ -0.26
VEGFA-206ENST00000372077 RPL24P83731 157 aaKnown RBP13.43□□□□□ -0.26
VEGFA-206ENST00000372077 RBMY1FQ15415 496 aaKnown RBP13.43□□□□□ -0.26
VEGFA-206ENST00000372077 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-206ENST00000372077 A0A087WWL8 130 aa13.42□□□□□ -0.26
VEGFA-206ENST00000372077 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-206ENST00000372077 HTN1P15515 57 aa13.42□□□□□ -0.26
VEGFA-206ENST00000372077 RPL35AP18077 110 aaKnown RBP13.42□□□□□ -0.26
VEGFA-206ENST00000372077 HSD52Q0P140 79 aa13.42□□□□□ -0.26
VEGFA-206ENST00000372077 KRTAP21-3Q3LHN1 58 aa13.42□□□□□ -0.26
VEGFA-206ENST00000372077 MUC4Q99102 2169 aa13.42□□□□□ -0.26
VEGFA-206ENST00000372077 K7EP34 96 aa13.41□□□□□ -0.26
VEGFA-206ENST00000372077 NRACQ8N912 160 aa13.41□□□□□ -0.26
VEGFA-206ENST00000372077 PHLDA3Q9Y5J5 127 aa13.41□□□□□ -0.26
VEGFA-206ENST00000372077 FAM74A4Q5TZK3 123 aa13.4□□□□□ -0.26
VEGFA-206ENST00000372077 XCL2Q9UBD3 114 aa13.4□□□□□ -0.26
VEGFA-206ENST00000372077 INSP01308 110 aa13.4□□□□□ -0.26
VEGFA-206ENST00000372077 FAM159AQ6UWV7 190 aa13.4□□□□□ -0.26
VEGFA-206ENST00000372077 CHAC1Q9BUX1 264 aa13.4□□□□□ -0.27
VEGFA-206ENST00000372077 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.27
VEGFA-206ENST00000372077 TRBV25-1A0A075B6N4 114 aa13.39□□□□□ -0.27
VEGFA-206ENST00000372077 IGHV1OR15-1A0A075B7D0 117 aa13.39□□□□□ -0.27
VEGFA-206ENST00000372077 A0A1W2PPM0 123 aa13.39□□□□□ -0.27
VEGFA-206ENST00000372077 LAGE3Q14657 143 aa13.39□□□□□ -0.27
VEGFA-206ENST00000372077 NXT2Q9NPJ8 142 aaKnown RBP13.39□□□□□ -0.27
VEGFA-206ENST00000372077 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
VEGFA-206ENST00000372077 TEX48A0A1B0GUV7 120 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 PRM2P04554 102 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 Q8N8P6 123 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 IGLV2-18A0A075B6J9 118 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 F5H697 171 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 C1orf158Q8N1D5 194 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 C1QTNF4Q9BXJ3 329 aa13.38□□□□□ -0.27
VEGFA-206ENST00000372077 DPM2O94777 84 aa13.37□□□□□ -0.27
VEGFA-206ENST00000372077 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
VEGFA-206ENST00000372077 RASL10AQ92737 203 aa13.36□□□□□ -0.27
VEGFA-206ENST00000372077 SCGB3A1Q96QR1 104 aa13.36□□□□□ -0.27
VEGFA-206ENST00000372077 MED14OSP0DP75 135 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 ASIPP42127 132 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 IGHV4-30-4P0DP06 118 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 SS18L2Q9UHA2 77 aa13.35□□□□□ -0.27
VEGFA-206ENST00000372077 RNASE3P12724 160 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms