RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 UTP20O75691 2785 aaKnown RBP2.75□□□□□ -1.97
MCF2-203ENST00000370576 CRYBG3Q68DQ2 2970 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 A6NN06 94 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 TPPP2P59282 170 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 FXYD3Q14802 87 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 Q86TA4 180 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 ANKRD29Q8N6D5 301 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 UBALD1Q8TB05 177 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 EPDR1Q9UM22 224 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 NF1P21359 2839 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 LOC102724200A0A096LPH7 203 aaPredicted RBP2.75□□□□□ -1.97
MCF2-203ENST00000370576 LINC01548A6NM66 108 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 CEBPZOSA8MTT3 80 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 TAS2R45P59539 299 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 TNFRSF19Q9NS68 423 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 IL36BQ9NZH7 164 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 PRO0461Q9UI25 63 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 PTPN13Q12923 2485 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 UNC79Q9P2D8 2635 aa2.75□□□□□ -1.97
MCF2-203ENST00000370576 H3BP45 60 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 DUSP14O95147 198 aaKnown RBP2.74□□□□□ -1.97
MCF2-203ENST00000370576 TCRAP04437 139 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 NFYBP25208 207 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 LINC00322Q6ZN03 302 aaPredicted RBP2.74□□□□□ -1.97
MCF2-203ENST00000370576 LINC00173Q6ZV60 143 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 LCA10Q71F78 164 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 LINC00612Q8N6U2 182 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 Q8N976 141 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 B9D2Q9BPU9 175 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
MCF2-203ENST00000370576 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 S100A2P29034 98 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 SYNJ2BPP57105 145 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 C10orf113Q5VZT2 155 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.74□□□□□ -1.97
MCF2-203ENST00000370576 FAM213BQ8TBF2 198 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H4GQ99525 98 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 SLC50A1Q9BRV3 221 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 HHLA3Q9XRX5 114 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 TRAV8-1A0A0A6YYK1 113 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 PEX7O00628 323 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 SLC25A34Q6PIV7 304 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 ZNF355PQ9NSJ1 428 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 KIF25-AS1Q9Y6Z4 181 aa2.74□□□□□ -1.97
MCF2-203ENST00000370576 HIVEP3Q5T1R4 2406 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 IGLV2-18A0A075B6J9 118 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 TRAV9-2A0A087WT02 112 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 INAFM1C9JVW0 142 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 C11orf94C9JXX5 98 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BKO60814 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HYPMO75409 117 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BJP06899 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BOP23527 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BBP33778 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BDP58876 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BCP62807 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST2H2BEQ16778 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 TMEM136Q6ZRR5 245 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 H1FXQ92522 213 aaKnown RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BHQ93079 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BNQ99877 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H2BMQ99879 126 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 PAXXQ9BUH6 204 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 PKHD1L1Q86WI1 4243 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 IGHV3-64DA0A0J9YX35 117 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 IFITM1P13164 125 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 PROK1P58294 105 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 DEFB112Q30KQ8 113 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 LINC00305Q7Z4B0 112 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 DNAH17Q9UFH2 4485 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 SCO2A0A1W2PP80 73 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
MCF2-203ENST00000370576 GDF5OSQ5U4N7 250 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 GFI1BQ5VTD9 330 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 TOMM6Q96B49 74 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
MCF2-203ENST00000370576 LINC00315P59091 139 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 KRTAP10-3P60369 221 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 ZFAND2AQ8N6M9 145 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 TSKUQ8WUA8 353 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.72□□□□□ -1.97
MCF2-203ENST00000370576 LYSTQ99698 3801 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 KPRPQ5T749 579 aaPredicted RBP2.72□□□□□ -1.97
MCF2-203ENST00000370576 SBSPONQ8IVN8 264 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 GTSF1Q8WW33 167 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 MUC21A0A0G2JKD1 596 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 IGLL5B9A064 214 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 NDUFC2-KCTD14E9PQ53 114 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 UQCRQO14949 82 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 ATP5G2Q06055 141 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 SPATA12Q7Z6I5 190 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 Q9H3A6 140 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms