RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 DEFB112Q30KQ8 113 aa13.76□□□□□ -0.21
CHRNA4-201ENST00000370263 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
CHRNA4-201ENST00000370263 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
CHRNA4-201ENST00000370263 VPREB3Q9UKI3 123 aa13.76□□□□□ -0.21
CHRNA4-201ENST00000370263 NACAE9PAV3 2078 aa13.75□□□□□ -0.21
CHRNA4-201ENST00000370263 ALPK3Q96L96 1907 aa13.75□□□□□ -0.21
CHRNA4-201ENST00000370263 TRAV23DV6A0A075B6W5 121 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 BLCAPP62952 87 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 IGHV4-28A0A0C4DH34 117 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 PDE6GP18545 87 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 Q8N7P7 452 aa13.74□□□□□ -0.21
CHRNA4-201ENST00000370263 GYPEP15421 78 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 MYCNOSP40205 109 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 RMI2Q96E14 147 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 TRBV30A0A0K0K1B3 111 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 NUP210Q8TEM1 1887 aaPredicted RBP13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 SLURP1P55000 103 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 CFAP126Q5VTH2 177 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 CEMP1Q6PRD7 247 aaPredicted RBP13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 SDIM1Q6ZPB5 146 aa13.73□□□□□ -0.21
CHRNA4-201ENST00000370263 IGLV10-54A0A075B6I4 117 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 CRIP1P50238 77 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 ETDCA0A1B0GVM5 59 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 C20orf197Q8N268 126 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 ZGRF1Q86YA3 2104 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 NCR3O14931 201 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 TRIAP1O43715 76 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 IGHV3-33P01772 117 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 GRNP28799 593 aaKnown RBP13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 CXCL5P42830 114 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 CAMK2N2Q96S95 79 aa13.72□□□□□ -0.21
CHRNA4-201ENST00000370263 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
CHRNA4-201ENST00000370263 TMEM223A0PJW6 202 aa13.71□□□□□ -0.21
CHRNA4-201ENST00000370263 TNRC6BQ9UPQ9 1833 aaKnown RBP13.71□□□□□ -0.21
CHRNA4-201ENST00000370263 GPHB5Q86YW7 130 aa13.71□□□□□ -0.21
CHRNA4-201ENST00000370263 RNF185Q96GF1 192 aa13.71□□□□□ -0.21
CHRNA4-201ENST00000370263 LINC00310P59036 64 aa13.71□□□□□ -0.22
CHRNA4-201ENST00000370263 PRB2P02812 416 aaPredicted RBP13.7□□□□□ -0.22
CHRNA4-201ENST00000370263 ZNF22P17026 224 aaPredicted RBP13.7□□□□□ -0.22
CHRNA4-201ENST00000370263 UBE2BP63146 152 aa13.7□□□□□ -0.22
CHRNA4-201ENST00000370263 FAM236DA0A1B0GTK5 79 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 FAM236CP0DP71 79 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 UNQ9165/PRO28630Q6UXU0 137 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 A0A0J9YX75 114 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 NDUFS5O43920 106 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 IGHV4-38-2P0DP08 117 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 FREM1Q5H8C1 2179 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 MRPS12O15235 138 aaKnown RBP13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 Q8N976 141 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 IGKV2D-24A0A075B6R9 120 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 XGP55808 180 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
CHRNA4-201ENST00000370263 CCL24O00175 119 aa13.68□□□□□ -0.22
CHRNA4-201ENST00000370263 TRBV12-3P01733 135 aa13.68□□□□□ -0.22
CHRNA4-201ENST00000370263 IMUPQ9GZP8 106 aa13.68□□□□□ -0.22
CHRNA4-201ENST00000370263 NDUFA7O95182 113 aa13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 SEM1Q6ZVN7 128 aa13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 DIRC1Q969H9 104 aa13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 Q96MF0 132 aa13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 ATP5EP2Q5VTU8 51 aa13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 SP5Q6BEB4 398 aaPredicted RBP13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 ZNF106Q9H2Y7 1883 aaKnown RBP13.67□□□□□ -0.22
CHRNA4-201ENST00000370263 IGHV4OR15-8A0A075B7B6 117 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 A0A087WW49 117 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 IGLV2-11P01706 119 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 IGHV3-30P01768 117 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 IGHV3-30-5P0DP03 117 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 CLUHP3Q96NS8 147 aa13.66□□□□□ -0.22
CHRNA4-201ENST00000370263 IGHV4-61A0A0C4DH41 118 aa13.65□□□□□ -0.22
CHRNA4-201ENST00000370263 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
CHRNA4-201ENST00000370263 CCDC179H3BU77 68 aa13.65□□□□□ -0.22
CHRNA4-201ENST00000370263 INSL3P51460 131 aa13.65□□□□□ -0.22
CHRNA4-201ENST00000370263 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
CHRNA4-201ENST00000370263 UFSP1Q6NVU6 142 aa13.64□□□□□ -0.23
CHRNA4-201ENST00000370263 IGLV4-3A0A075B6K6 122 aa13.64□□□□□ -0.23
CHRNA4-201ENST00000370263 LINC00308Q8TCZ7 52 aa13.64□□□□□ -0.23
CHRNA4-201ENST00000370263 NDUFA1O15239 70 aa13.64□□□□□ -0.23
CHRNA4-201ENST00000370263 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
CHRNA4-201ENST00000370263 RPL18AQ02543 176 aaKnown RBP13.63□□□□□ -0.23
CHRNA4-201ENST00000370263 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
CHRNA4-201ENST00000370263 PIP4P1Q86T03 277 aa13.63□□□□□ -0.23
CHRNA4-201ENST00000370263 HHLA3Q9XRX5 114 aa13.62□□□□□ -0.23
CHRNA4-201ENST00000370263 SPAG11BQ08648 103 aa13.61□□□□□ -0.23
CHRNA4-201ENST00000370263 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
CHRNA4-201ENST00000370263 ODF3Q96PU9 254 aa13.61□□□□□ -0.23
CHRNA4-201ENST00000370263 SIRPDQ9H106 197 aa13.61□□□□□ -0.23
CHRNA4-201ENST00000370263 NDUFB1O75438 58 aa13.6□□□□□ -0.23
CHRNA4-201ENST00000370263 SERP2Q8N6R1 65 aa13.6□□□□□ -0.23
CHRNA4-201ENST00000370263 ENHOQ6UWT2 76 aa13.59□□□□□ -0.23
CHRNA4-201ENST00000370263 NRACQ8N912 160 aa13.59□□□□□ -0.23
CHRNA4-201ENST00000370263 SPRY4Q9C004 299 aa13.59□□□□□ -0.23
CHRNA4-201ENST00000370263 PCNX2A6NKB5 2137 aa13.59□□□□□ -0.23
CHRNA4-201ENST00000370263 NDUFC2-KCTD14E9PQ53 114 aa13.58□□□□□ -0.24
CHRNA4-201ENST00000370263 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
CHRNA4-201ENST00000370263 TNCP24821 2201 aa13.58□□□□□ -0.24
CHRNA4-201ENST00000370263 COX7BP24311 80 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms