RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 FAM104BQ5XKR9 115 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 ZFP2Q6ZN57 461 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 CCL28Q9NRJ3 127 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 MOB4Q9Y3A3 225 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 IGLV3-32A0A0A0MS00 114 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 A0A1B0GUT8 65 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 H0Y9J4 135 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00313P59037 77 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 LINC00205P59089 165 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 TMEM155Q4W5P6 130 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 VN1R4Q7Z5H5 301 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 DAND5Q8N907 189 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 LINC01560Q8TB33 94 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
UBE3D-202ENST00000369746 FREM3P0C091 2139 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 FAM229AH3BQW9 127 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 K7EQD1 137 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 EDDM3BP56851 147 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 Q8N8P6 123 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 RNF185Q96GF1 192 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 TAC3Q9UHF0 121 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 LCE6AA0A183 80 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 H3BVH4 76 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 ZNF80P51504 273 aaPredicted RBP3.77□□□□□ -1.81
UBE3D-202ENST00000369746 FP248Q71RG6 208 aaPredicted RBP3.77□□□□□ -1.81
UBE3D-202ENST00000369746 ORMDL3Q8N138 153 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
UBE3D-202ENST00000369746 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 C1orf229Q6ZS94 237 aaPredicted RBP3.76□□□□□ -1.81
UBE3D-202ENST00000369746 SLC25A15Q9Y619 301 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 PLXNB1O43157 2135 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
UBE3D-202ENST00000369746 M0R135 149 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 MP68P56378 58 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 C9orf106Q8NAJ2 232 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 DEFB127Q9H1M4 99 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 CSPG4Q6UVK1 2322 aa3.76□□□□□ -1.81
UBE3D-202ENST00000369746 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV4-30-2A0A087WSY4 118 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 IGKV1-8A0A0C4DH67 115 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 LOC389332A0A1B0GUA5 103 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 LINC01548A6NM66 108 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 HERVK_113P61574 105 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 CEMP1Q6PRD7 247 aaPredicted RBP3.75□□□□□ -1.81
UBE3D-202ENST00000369746 LOC400499M0QZD8 3231 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 AGRNO00468 2067 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV1-58A0A0C4DH39 117 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 A0A1W2PQD3 144 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 NXPH3O95157 252 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 IGKV3-11P04433 115 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 IFI27P40305 119 aaPredicted RBP3.75□□□□□ -1.81
UBE3D-202ENST00000369746 FGF12P61328 243 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 PCBD1P61457 104 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 VSIG2Q96IQ7 327 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 LYZL4Q96KX0 146 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 PROK2Q9HC23 129 aa3.75□□□□□ -1.81
UBE3D-202ENST00000369746 MPDZO75970 2070 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 TEX49A0A1B0GTD5 131 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 KLLNB2CW77 178 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 K7EMI3 77 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 COX7A2LO14548 114 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 NDUFC1O43677 76 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV3-33P01772 117 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 CFC1P0CG37 223 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 EIF4EBP1Q13541 118 aaPredicted RBP3.74□□□□□ -1.81
UBE3D-202ENST00000369746 MSMPQ1L6U9 139 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 C2orf82Q6UX34 121 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 ZNF329Q86UD4 541 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 NUP37Q8NFH4 326 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 B9D2Q9BPU9 175 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 CTSZQ9UBR2 303 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 IGLV2-14P01704 120 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 SYNJ2BPP57105 145 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 Q6JHZ5 121 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 MDP1Q86V88 176 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 CHCHD10Q8WYQ3 142 aaPredicted RBP3.74□□□□□ -1.81
UBE3D-202ENST00000369746 KRTAP17-1Q9BYP8 105 aa3.74□□□□□ -1.81
UBE3D-202ENST00000369746 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 IGKV1-6A0A0C4DH72 117 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 A0A0J9YXV3 536 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 PINLYPA6NC86 204 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 C12orf77C9JDV5 145 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 F8VRH5 84 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 SPTBP11277 2137 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 ZNF138P52744 262 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 ZNF714Q96N38 554 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 MYO7BQ6PIF6 2116 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 IGKV1-27A0A075B6S5 117 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 TRBV12-3P01733 135 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 IGHV3-9P01782 118 aa3.73□□□□□ -1.81
UBE3D-202ENST00000369746 LGALS3P17931 250 aaKnown RBP3.73□□□□□ -1.81
UBE3D-202ENST00000369746 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
UBE3D-202ENST00000369746 UTP20O75691 2785 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms