RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 CITED1Q99966 193 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 A0A087WZ39 114 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 IGHV4-61A0A0C4DH41 118 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 E7EUB6 86 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 K7ERS5 55 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 RS1O15537 224 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 HILS1P60008 231 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 GATA1P15976 413 aaPredicted RBP6.93□□□□□ -1.3
SYNE1-205ENST00000367251 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
SYNE1-205ENST00000367251 H3BQ85 93 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 PROP1O75360 226 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 MYCNOSP40205 109 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 TDRG1Q3Y452 100 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 ODF3Q96PU9 254 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 DOCK11Q5JSL3 2073 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 HIST2H2BCQ6DN03 193 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 HIGD2AQ9BW72 106 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 C2orf70A6NJV1 201 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 MBD6Q96DN6 1003 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 KLK12Q9UKR0 248 aa6.93□□□□□ -1.3
SYNE1-205ENST00000367251 TNRC6AQ8NDV7 1962 aaKnown RBP6.92□□□□□ -1.3
SYNE1-205ENST00000367251 RPL39LQ96EH5 51 aaKnown RBP6.92□□□□□ -1.3
SYNE1-205ENST00000367251 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
SYNE1-205ENST00000367251 CRYGBP07316 175 aa6.92□□□□□ -1.3
SYNE1-205ENST00000367251 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
SYNE1-205ENST00000367251 K7EQD1 137 aa6.92□□□□□ -1.3
SYNE1-205ENST00000367251 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 FSHBP01225 129 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 PRAC2D3DTV9 90 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 H0YGX0 51 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-205ENST00000367251 IGKV2-29A2NJV5 120 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-205ENST00000367251 VSIG2Q96IQ7 327 aa6.91□□□□□ -1.3
SYNE1-205ENST00000367251 DYSFO75923 2080 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 SPATA25Q9BR10 227 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 A6NDX4 124 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 INAFM1C9JVW0 142 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 M0R2N4 97 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 Q9H8V8 135 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 INSL3P51460 131 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 NREPQ16612 68 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
SYNE1-205ENST00000367251 EBI3Q14213 229 aa6.9□□□□□ -1.31
SYNE1-205ENST00000367251 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.31
SYNE1-205ENST00000367251 ZGRF1Q86YA3 2104 aa6.9□□□□□ -1.31
SYNE1-205ENST00000367251 NTN5Q8WTR8 489 aaPredicted RBP6.89□□□□□ -1.31
SYNE1-205ENST00000367251 SPRY2O43597 315 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 UBE2D3P61077 147 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 C4orf3Q8WVX3 66 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 TEN1Q86WV5 123 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 Q8NA96 180 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 EML6Q6ZMW3 1958 aa6.89□□□□□ -1.31
SYNE1-205ENST00000367251 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.88□□□□□ -1.31
SYNE1-205ENST00000367251 IGLV2-18A0A075B6J9 118 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 LY6LH3BQJ8 138 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 MUSTN1Q8IVN3 82 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 U3KQK5 164 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 FXYD2P54710 66 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 Q8N1Y9 231 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 BLCAPP62952 87 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 IGF1P05019 195 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 PRO3102Q9H379 93 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 MDFICQ9P1T7 246 aa6.88□□□□□ -1.31
SYNE1-205ENST00000367251 NAV3Q8IVL0 2385 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 TNFRSF13BO14836 293 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-205ENST00000367251 SPAG11BQ08648 103 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 A0A0J9YX75 114 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 NACAE9PAV3 2078 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 A4D1N5 150 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-205ENST00000367251 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 IGHV4OR15-8A0A075B7B6 117 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 A0A087WW49 117 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 CRYBA4P53673 196 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
SYNE1-205ENST00000367251 CCDC140Q96MF4 163 aa6.87□□□□□ -1.31
SYNE1-205ENST00000367251 LGALS9O00182 355 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 GDF5OSQ5U4N7 250 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 DEFB131BA0A096LNP1 70 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 C20orf203Q8NBC4 194 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 C9orf85Q96MD7 179 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 H3BT86 120 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 CXCL5P42830 114 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 TRBV10-1A0A0K0K1A3 114 aa6.86□□□□□ -1.31
SYNE1-205ENST00000367251 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
SYNE1-205ENST00000367251 ABCA2Q9BZC7 2435 aa6.85□□□□□ -1.31
SYNE1-205ENST00000367251 IGHV1-58A0A0C4DH39 117 aa6.85□□□□□ -1.31
SYNE1-205ENST00000367251 NCR3O14931 201 aa6.85□□□□□ -1.31
SYNE1-205ENST00000367251 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms