RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 DPPA3Q6W0C5 159 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 CIB3Q96Q77 187 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 MGST2Q99735 147 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 HIST1H2BLQ99880 126 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 ALKBH7Q9BT30 221 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 GTSF1LQ9H1H1 148 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 ZNF492Q9P255 531 aa5.38□□□□□ -1.55
HMGB1P39-201ENST00000366304 IGKV2D-24A0A075B6R9 120 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 IGHV3-73A0A0B4J1V6 119 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 GNRH2O43555 120 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 COX7A2P2O60397 106 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 LINC00694P0DN24 101 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 IAH1Q2TAA2 248 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 SPXQ9BT56 116 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 NMES1Q9C002 83 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 CTDSP1Q9GZU7 261 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 GSKIPQ9P0R6 139 aa5.37□□□□□ -1.55
HMGB1P39-201ENST00000366304 TRBV24-1A0A075B6N3 115 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 A0A0J9YXV3 536 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 SERTM2A0A1B0GWG4 89 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 F6UZH7 168 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 PRSS1P07477 247 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 PYYP10082 97 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 C10orf113Q5VZT2 155 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 TMEM14EPQ6UXP3 125 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 SDIM1Q6ZPB5 146 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 NPVFQ9HCQ7 196 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 PSENENQ9NZ42 101 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 NAGKQ9UJ70 344 aa5.36□□□□□ -1.55
HMGB1P39-201ENST00000366304 GGTLC3B5MD39 225 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 UMAD1C9J7I0 102 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 M0R2P5 195 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 SCGB1D2O95969 90 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 SLPIP03973 132 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 SEC11BP0C7V7 166 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 TRGC1P0CF51 173 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 ZNF266Q14584 549 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 CFAP126Q5VTH2 177 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 AQP10Q96PS8 301 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 KLK12Q9UKR0 248 aa5.35□□□□□ -1.55
HMGB1P39-201ENST00000366304 TRAV8-1A0A0A6YYK1 113 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 FBLL1A6NHQ2 334 aaKnown RBP5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 SSSCA1O60232 199 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 MBPP02686 304 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 ZNF138P52744 262 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 CIRBPQ14011 172 aaKnown RBP5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 ELOBQ15370 118 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 VWC2Q2TAL6 325 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 TMEM78Q5T7P6 136 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 MIC13Q5XKP0 118 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 Q6AWC8 147 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 S100A7AQ86SG5 101 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 TVP23CQ96ET8 276 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 CYTL1Q9NRR1 136 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 RNF24Q9Y225 148 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 COX11Q9Y6N1 276 aa5.34□□□□□ -1.55
HMGB1P39-201ENST00000366304 GAGE12JA6NER3 117 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 USP17L23D6RBM5 183 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 FNDC10F2Z333 226 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 TAGLN2P37802 199 aaKnown RBP5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 AKR1C3P42330 323 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 RPL29P47914 159 aaKnown RBP5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 TAS2R30P59541 319 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 GAGE4Q13068 117 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 GAGE5Q13069 117 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 RHOHQ15669 191 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 GAGE13Q4V321 117 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 OCIAD2Q56VL3 154 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 NIT1Q86X76 327 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 PPP1R1CQ8WVI7 109 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 UBE2WQ96B02 151 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 PRADC1Q9BSG0 188 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 EIF5A2Q9GZV4 153 aaKnown RBP5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 KIF25-AS1Q9Y6Z4 181 aa5.33□□□□□ -1.56
HMGB1P39-201ENST00000366304 TRGV11A0A075B6L2 103 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 A0A087WYN8 130 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 BORCS7-ASMTA0A0B4J1R7 106 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 CCL25O15444 150 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 TYMSP04818 313 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 HIST1H1EP10412 219 aaKnown RBP5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 S100A10P60903 97 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 IL15RAQ13261 267 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 GCSAMLQ5JQS6 135 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 PRR27Q6MZM9 219 aa5.32□□□□□ -1.56
HMGB1P39-201ENST00000366304 ENHOQ6UWT2 76 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms