RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HELZP42694 1942 aaKnown RBP-1.17□□□□□ -2.6
RNU4-28P-201ENST00000364739 MYO7BQ6PIF6 2116 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 WDR97A6NE52 1622 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 SSSCA1O60232 199 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 SLC25A4P12235 298 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 RPL19P84098 196 aaKnown RBP-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 DEFB110Q30KQ9 67 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 DYDC1Q8WWB3 177 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 USP34Q70CQ2 3546 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 UNC80Q8N2C7 3258 aa-1.18□□□□□ -2.6
RNU4-28P-201ENST00000364739 COL4A6Q14031 1691 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 FAM92AA1XBS5 289 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 TMEM210A6NLX4 147 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 IFITM5A6NNB3 132 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 SPINK4O60575 86 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 NMBP08949 121 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 TAS2R41P59536 307 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 BASP1P80723 227 aaKnown RBP-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 DNAH14Q0VDD8 3507 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 SMIM7Q9BQ49 75 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 PRO0255Q9UI72 69 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 PLXNA1Q9UIW2 1896 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 DOCK11Q5JSL3 2073 aa-1.19□□□□□ -2.6
RNU4-28P-201ENST00000364739 ARHGEF5Q12774 1597 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 PPIP5K1Q6PFW1 1433 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 AKR1D1P51857 326 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 LINC00305Q7Z4B0 112 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 FAM24BQ8N5W8 94 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 OR51A4Q8NGJ6 313 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 FXYD6Q9H0Q3 95 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 LINC00472Q9H8W2 130 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 LAMTOR3Q9UHA4 124 aa-1.2□□□□□ -2.6
RNU4-28P-201ENST00000364739 TRBV27A0A0K0K1C4 114 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 MCRIP1C9JLW8 97 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 TFF1P04155 84 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 S100A11P31949 105 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 BLCAPP62952 87 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 UNQ5815/PRO19632Q6UWF5 114 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 Q6ZRX8 168 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 TP53AIP1Q9HCN2 124 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 UFC1Q9Y3C8 167 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 FMN2Q9NZ56 1722 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 ASXL1Q8IXJ9 1541 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 KIDINS220Q9ULH0 1771 aa-1.21□□□□□ -2.6
RNU4-28P-201ENST00000364739 FRYLO94915 3013 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 PYYP10082 97 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 CLPSL2Q6UWE3 100 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 MORN4Q8NDC4 146 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 WFDC9Q8NEX5 89 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 DPH3Q96FX2 82 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 TMEM141Q96I45 108 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 CNFNQ9BYD5 112 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 BPESC1Q9GZL8 116 aa-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 CDK13Q14004 1512 aaKnown RBP-1.22□□□□□ -2.6
RNU4-28P-201ENST00000364739 ADGRB1O14514 1584 aa-1.22□□□□□ -2.61
RNU4-28P-201ENST00000364739 A0A087WVE0 104 aa-1.23□□□□□ -2.61
RNU4-28P-201ENST00000364739 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.23□□□□□ -2.61
RNU4-28P-201ENST00000364739 TRAV22A0A0B4J277 110 aa-1.23□□□□□ -2.61
RNU4-28P-201ENST00000364739 NCR2O95944 276 aa-1.23□□□□□ -2.61
RNU4-28P-201ENST00000364739 H1FX-AS1Q4G0G2 97 aa-1.23□□□□□ -2.61
RNU4-28P-201ENST00000364739 TRGV1A0A0A0MS02 117 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 TRAV13-1A0A0B4J241 112 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 EMX2Q04743 252 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 ALX1Q15699 326 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 Q5VV11 94 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 AMELXQ99217 191 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 COA4Q9NYJ1 87 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 CFAP47Q6ZTR5 3102 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 CEP250Q9BV73 2442 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 C10orf71Q711Q0 1435 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 FYCO1Q9BQS8 1478 aa-1.24□□□□□ -2.61
RNU4-28P-201ENST00000364739 SLIT1O75093 1534 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 FXYD6-FXYD2A0A087WZ82 144 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 GVQW2A0A096LPI5 108 aaPredicted RBP-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 A0A0D9SFI3 127 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 CRYGSP22914 178 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 ELOF1P60002 83 aaKnown RBP-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 C9orf62Q8N4C0 152 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 STX19Q8N4C7 294 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 SSC5DA1L4H1 1573 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 ADAMTS12P58397 1594 aa-1.25□□□□□ -2.61
RNU4-28P-201ENST00000364739 SIPA1L3O60292 1781 aaPredicted RBP-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 PLXNA2O75051 1894 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 TRBV10-1A0A0K0K1A3 114 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 LCE6AA0A183 80 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 ADCYAP1P18509 176 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 SPRR1BP22528 89 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 SDC4P31431 198 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 TCTAP57738 103 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 HRCT1Q6UXD1 115 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 AP3S1Q92572 193 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 LINC01600Q96MT4 127 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 DNAH12Q6ZR08 3092 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 PTPN23Q9H3S7 1636 aa-1.26□□□□□ -2.61
RNU4-28P-201ENST00000364739 PCNTO95613 3336 aa-1.27□□□□□ -2.61
RNU4-28P-201ENST00000364739 H3BMG7 143 aa-1.27□□□□□ -2.61
RNU4-28P-201ENST00000364739 POLR2JP52435 117 aaKnown RBP-1.27□□□□□ -2.61
RNU4-28P-201ENST00000364739 CRYBA4P53673 196 aa-1.27□□□□□ -2.61
RNU4-28P-201ENST00000364739 OTOSQ8NHW6 89 aa-1.27□□□□□ -2.61
RNU4-28P-201ENST00000364739 CHMP6Q96FZ7 201 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms