RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 Q6ZRU5 148 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 ZNF471Q9BX82 626 aaPredicted RBP13.5□□□□□ -0.25
CD47-202ENST00000361309 MAP1LC3BQ9GZQ8 125 aa13.5□□□□□ -0.25
CD47-202ENST00000361309 A0A0D9SG52 128 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 F5H697 171 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 TCEAL7Q9BRU2 100 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 DERL1Q9BUN8 251 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 VAX2Q9UIW0 290 aa13.49□□□□□ -0.25
CD47-202ENST00000361309 FXYD6-FXYD2A0A087WZ82 144 aa13.48□□□□□ -0.25
CD47-202ENST00000361309 FHITP49789 147 aa13.48□□□□□ -0.25
CD47-202ENST00000361309 CLRN3Q8NCR9 226 aa13.48□□□□□ -0.25
CD47-202ENST00000361309 STOML3Q8TAV4 291 aa13.48□□□□□ -0.25
CD47-202ENST00000361309 CXCL1P09341 107 aa13.47□□□□□ -0.25
CD47-202ENST00000361309 GIPP09681 153 aaPredicted RBP13.47□□□□□ -0.25
CD47-202ENST00000361309 SSTP61278 116 aa13.47□□□□□ -0.25
CD47-202ENST00000361309 TRBV25-1A0A075B6N4 114 aa13.46□□□□□ -0.25
CD47-202ENST00000361309 SNAI2O43623 268 aa13.46□□□□□ -0.25
CD47-202ENST00000361309 CIRBPQ14011 172 aaKnown RBP13.46□□□□□ -0.25
CD47-202ENST00000361309 SPANXN1Q5VSR9 72 aa13.46□□□□□ -0.25
CD47-202ENST00000361309 SSBP4Q9BWG4 385 aaPredicted RBP13.46□□□□□ -0.25
CD47-202ENST00000361309 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
CD47-202ENST00000361309 hDV102S1A0JD36 115 aa13.44□□□□□ -0.26
CD47-202ENST00000361309 PAGE4O60829 102 aa13.44□□□□□ -0.26
CD47-202ENST00000361309 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
CD47-202ENST00000361309 CNBPP62633 177 aaKnown RBP13.44□□□□□ -0.26
CD47-202ENST00000361309 REG3AQ06141 175 aa13.44□□□□□ -0.26
CD47-202ENST00000361309 KIF25-AS1Q9Y6Z4 181 aa13.44□□□□□ -0.26
CD47-202ENST00000361309 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
CD47-202ENST00000361309 DPH3Q96FX2 82 aa13.43□□□□□ -0.26
CD47-202ENST00000361309 S100A9P06702 114 aaKnown RBP13.42□□□□□ -0.26
CD47-202ENST00000361309 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
CD47-202ENST00000361309 MLST8Q9BVC4 326 aa13.42□□□□□ -0.26
CD47-202ENST00000361309 TNXBP22105 4242 aa13.42□□□□□ -0.26
CD47-202ENST00000361309 LRP2P98164 4655 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 IGHV3-64A0A075B6Q5 118 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 A0A087WYN8 130 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 IGHV1-24A0A0C4DH33 117 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 C20orf203Q8NBC4 194 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 CYTL1Q9NRR1 136 aa13.41□□□□□ -0.26
CD47-202ENST00000361309 SCO2A0A1W2PP80 73 aa13.4□□□□□ -0.26
CD47-202ENST00000361309 SLPIP03973 132 aa13.4□□□□□ -0.26
CD47-202ENST00000361309 AP1S3Q96PC3 154 aa13.4□□□□□ -0.26
CD47-202ENST00000361309 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
CD47-202ENST00000361309 P01737 135 aa13.39□□□□□ -0.27
CD47-202ENST00000361309 RNF185Q96GF1 192 aa13.39□□□□□ -0.27
CD47-202ENST00000361309 AP5S1Q9NUS5 200 aa13.39□□□□□ -0.27
CD47-202ENST00000361309 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
CD47-202ENST00000361309 RAB5CP51148 216 aa13.38□□□□□ -0.27
CD47-202ENST00000361309 SPACA4Q8TDM5 124 aa13.38□□□□□ -0.27
CD47-202ENST00000361309 RNF213Q63HN8 5207 aa13.37□□□□□ -0.27
CD47-202ENST00000361309 IGLV4-60A0A075B6I1 120 aa13.37□□□□□ -0.27
CD47-202ENST00000361309 M0QY20 66 aa13.37□□□□□ -0.27
CD47-202ENST00000361309 MGPP08493 103 aa13.37□□□□□ -0.27
CD47-202ENST00000361309 GFRA4Q9GZZ7 299 aa13.37□□□□□ -0.27
CD47-202ENST00000361309 A0A1B0GV50 99 aa13.36□□□□□ -0.27
CD47-202ENST00000361309 G3V3Q6 166 aa13.36□□□□□ -0.27
CD47-202ENST00000361309 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
CD47-202ENST00000361309 PHOX2AO14813 284 aa13.35□□□□□ -0.27
CD47-202ENST00000361309 ARPC5O15511 151 aa13.35□□□□□ -0.27
CD47-202ENST00000361309 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
CD47-202ENST00000361309 TMEM243Q9BU79 118 aa13.35□□□□□ -0.27
CD47-202ENST00000361309 H7C1H1 209 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 PFDN1O60925 122 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 SUMO4Q6EEV6 95 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 DPH3P1Q9H4G8 78 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 PLAC8Q9NZF1 115 aa13.34□□□□□ -0.27
CD47-202ENST00000361309 GZMBP10144 247 aa13.33□□□□□ -0.28
CD47-202ENST00000361309 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.28
CD47-202ENST00000361309 TMUB2Q71RG4 321 aa13.33□□□□□ -0.28
CD47-202ENST00000361309 FAM213BQ8TBF2 198 aa13.33□□□□□ -0.28
CD47-202ENST00000361309 TPPP3Q9BW30 176 aa13.33□□□□□ -0.28
CD47-202ENST00000361309 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
CD47-202ENST00000361309 IGLC6P0CF74 106 aa13.3□□□□□ -0.28
CD47-202ENST00000361309 RPL35P42766 123 aaKnown RBP13.3□□□□□ -0.28
CD47-202ENST00000361309 COX6A2Q02221 97 aa13.3□□□□□ -0.28
CD47-202ENST00000361309 WDR73Q6P4I2 378 aa13.3□□□□□ -0.28
CD47-202ENST00000361309 C15orf56Q8N910 161 aa13.3□□□□□ -0.28
CD47-202ENST00000361309 FER1L6-AS1Q8NA97 138 aa13.3□□□□□ -0.28
CD47-202ENST00000361309 UBE2L6O14933 153 aa13.29□□□□□ -0.28
CD47-202ENST00000361309 SULT1A2P50226 295 aa13.29□□□□□ -0.28
CD47-202ENST00000361309 RASL11AQ6T310 242 aa13.29□□□□□ -0.28
CD47-202ENST00000361309 KCNRGQ8N5I3 272 aa13.29□□□□□ -0.28
CD47-202ENST00000361309 PGLYRP4Q96LB8 373 aa13.28□□□□□ -0.28
CD47-202ENST00000361309 LINC01600Q96MT4 127 aa13.28□□□□□ -0.28
CD47-202ENST00000361309 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 UMAD1C9J7I0 102 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 CACNG7P62955 275 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 ODF1Q14990 250 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 MAJINQ3KP22 176 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 CFAP161Q6P656 301 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 OR2D3Q8NGH3 330 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 NIT2Q9NQR4 276 aa13.27□□□□□ -0.29
CD47-202ENST00000361309 IGKV2-24A0A0C4DH68 120 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms