RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FOXL2NBQ6ZUU3 175 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 G3V318 75 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 NDUFA11Q86Y39 141 aa10.32□□□□□ -0.76
SRGAP3-201ENST00000360413 NDUFC1O43677 76 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 PIFOQ8TCI5 191 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 NDUFA7O95182 113 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 Q8N1Y9 231 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 IGHV4OR15-8A0A075B7B6 117 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 A0A087WW49 117 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
SRGAP3-201ENST00000360413 TPSG1Q9NRR2 321 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 C17orf82Q86X59 251 aaPredicted RBP10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 C10orf105Q8TEF2 133 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 ACANP16112 2415 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 Q6ZQT7 251 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 NCR3O14931 201 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR20EP86478 221 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR20CP86479 221 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR20DP86480 221 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR20BP86481 221 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR20AP86496 221 aa10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 PRR30Q53SZ7 412 aaPredicted RBP10.3□□□□□ -0.76
SRGAP3-201ENST00000360413 C17orf58Q2M2W7 97 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 COL4A1P02462 1669 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 LTBP1Q14766 1721 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 TLN2Q9Y4G6 2542 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 ODF1Q14990 250 aa10.29□□□□□ -0.76
SRGAP3-201ENST00000360413 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
SRGAP3-201ENST00000360413 SPRY2O43597 315 aa10.28□□□□□ -0.76
SRGAP3-201ENST00000360413 LY6HO94772 140 aa10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 MED14OSP0DP75 135 aa10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 A0A0J9YY99 117 aa10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 A6NED7 52 aa10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 CLUHP3Q96NS8 147 aa10.27□□□□□ -0.76
SRGAP3-201ENST00000360413 C11orf86A6NJI1 115 aa10.27□□□□□ -0.77
SRGAP3-201ENST00000360413 FHL1Q13642 323 aa10.27□□□□□ -0.77
SRGAP3-201ENST00000360413 ZNF491Q8N8L2 437 aa10.27□□□□□ -0.77
SRGAP3-201ENST00000360413 C1orf147Q96MC9 270 aaPredicted RBP10.27□□□□□ -0.77
SRGAP3-201ENST00000360413 SMAD5-AS1Q9Y6J3 95 aa10.27□□□□□ -0.77
SRGAP3-201ENST00000360413 LOXL1Q08397 574 aaPredicted RBP10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 SERP1Q9Y6X1 66 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 B3GALT5-AS1P59052 145 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 BPY2O14599 106 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 RBX1P62877 108 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 ZNF706Q9Y5V0 76 aaPredicted RBP10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 H7C423 109 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 AGPAT4-IT1Q9H0P7 198 aa10.26□□□□□ -0.77
SRGAP3-201ENST00000360413 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 COX7BP24311 80 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 SPAG11BQ08648 103 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 TIMM17BO60830 172 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 ZFHX2Q9C0A1 2572 aaPredicted RBP10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 DEFB113Q30KQ7 82 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 ENHOQ6UWT2 76 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
SRGAP3-201ENST00000360413 C15orf65H3BRN8 121 aa10.24□□□□□ -0.77
SRGAP3-201ENST00000360413 Q6ZR03 302 aa10.24□□□□□ -0.77
SRGAP3-201ENST00000360413 HIST2H2BDQ6DRA6 164 aa10.24□□□□□ -0.77
SRGAP3-201ENST00000360413 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
SRGAP3-201ENST00000360413 FN1P02751 2386 aaKnown RBP10.24□□□□□ -0.77
SRGAP3-201ENST00000360413 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 M0QXV9 152 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 LRP4O75096 1905 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 ADAMTS20P59510 1910 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 NPBQ8NG41 125 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 IGLV3-9A0A075B6K5 115 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 IGLV1-44P01699 117 aa10.23□□□□□ -0.77
SRGAP3-201ENST00000360413 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 K7EMT4 169 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 NFE4Q86UQ8 179 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 RNF185Q96GF1 192 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 LYRM9A8MSI8 78 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 MIAQ16674 131 aa10.22□□□□□ -0.77
SRGAP3-201ENST00000360413 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
SRGAP3-201ENST00000360413 PIEZO1Q92508 2521 aa10.21□□□□□ -0.78
SRGAP3-201ENST00000360413 SNURFQ9Y675 71 aa10.2□□□□□ -0.78
SRGAP3-201ENST00000360413 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
SRGAP3-201ENST00000360413 MYCNOSP40205 109 aa10.2□□□□□ -0.78
SRGAP3-201ENST00000360413 SERP2Q8N6R1 65 aa10.2□□□□□ -0.78
SRGAP3-201ENST00000360413 VWCEQ96DN2 955 aa10.2□□□□□ -0.78
SRGAP3-201ENST00000360413 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
SRGAP3-201ENST00000360413 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms