RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 A0A1B0GW15 77 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 M0QY20 66 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 LINC00694P0DN24 101 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 UBE2D3P61077 147 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 UBE2D2P62837 147 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
HLA-DRB1-201ENST00000360004 TRAV9-2A0A087WT02 112 aa13.15□□□□□ -0.3
HLA-DRB1-201ENST00000360004 TRAV26-2A0A0B4J265 109 aa13.15□□□□□ -0.3
HLA-DRB1-201ENST00000360004 IGHV3-38A0A0C4DH36 116 aa13.15□□□□□ -0.3
HLA-DRB1-201ENST00000360004 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
HLA-DRB1-201ENST00000360004 DNAH1Q9P2D7 4330 aa13.14□□□□□ -0.31
HLA-DRB1-201ENST00000360004 HBBP68871 147 aa13.14□□□□□ -0.31
HLA-DRB1-201ENST00000360004 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
HLA-DRB1-201ENST00000360004 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
HLA-DRB1-201ENST00000360004 RYR2Q92736 4967 aa13.13□□□□□ -0.31
HLA-DRB1-201ENST00000360004 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
HLA-DRB1-201ENST00000360004 DAZ4Q86SG3 579 aaKnown RBP13.13□□□□□ -0.31
HLA-DRB1-201ENST00000360004 DAZ3Q9NR90 486 aaKnown RBP13.13□□□□□ -0.31
HLA-DRB1-201ENST00000360004 SACSQ9NZJ4 4579 aa13.12□□□□□ -0.31
HLA-DRB1-201ENST00000360004 TMEM97Q5BJF2 176 aa13.12□□□□□ -0.31
HLA-DRB1-201ENST00000360004 AMN1Q8IY45 258 aa13.12□□□□□ -0.31
HLA-DRB1-201ENST00000360004 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
HLA-DRB1-201ENST00000360004 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
HLA-DRB1-201ENST00000360004 APOC3P02656 99 aa13.11□□□□□ -0.31
HLA-DRB1-201ENST00000360004 S100PP25815 95 aa13.11□□□□□ -0.31
HLA-DRB1-201ENST00000360004 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
HLA-DRB1-201ENST00000360004 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
HLA-DRB1-201ENST00000360004 C1orf134Q5TEV5 83 aa13.1□□□□□ -0.31
HLA-DRB1-201ENST00000360004 FRZBQ92765 325 aa13.1□□□□□ -0.31
HLA-DRB1-201ENST00000360004 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
HLA-DRB1-201ENST00000360004 RPS10P5Q9NQ39 176 aa13.1□□□□□ -0.31
HLA-DRB1-201ENST00000360004 IGHV3-30P01768 117 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 IGHV3-33P01772 117 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 IGHV3-30-3P0DP02 117 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 IGHV3-30-5P0DP03 117 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 RAB4AP20338 218 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 Q6ZR54 194 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 CLRN3Q8NCR9 226 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
HLA-DRB1-201ENST00000360004 RHEBQ15382 184 aa13.08□□□□□ -0.32
HLA-DRB1-201ENST00000360004 C10orf91Q5T1B1 145 aa13.08□□□□□ -0.32
HLA-DRB1-201ENST00000360004 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.32
HLA-DRB1-201ENST00000360004 CHCHD5Q9BSY4 110 aa13.08□□□□□ -0.32
HLA-DRB1-201ENST00000360004 RYR3Q15413 4870 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 A0A087WX48 190 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 TRBV6-8A0A0A6YYG3 113 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 C7orf77A4D0Y5 90 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 FAM104BQ5XKR9 115 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 SVBPQ8N300 66 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 C6orf223Q8N319 242 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 RNF185Q96GF1 192 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
HLA-DRB1-201ENST00000360004 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 K7EP13 123 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 SNAPINO95295 136 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 NCR2O95944 276 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 PPP1R17O96001 155 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 COTL1Q14019 142 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 LINC01556Q5JQF7 62 aa13.06□□□□□ -0.32
HLA-DRB1-201ENST00000360004 IGHV1-24A0A0C4DH33 117 aa13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 CKS2P33552 79 aa13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 PKIAP61925 76 aa13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 MRPL51Q4U2R6 128 aaKnown RBP13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
HLA-DRB1-201ENST00000360004 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
HLA-DRB1-201ENST00000360004 PMCHP20382 165 aa13.04□□□□□ -0.32
HLA-DRB1-201ENST00000360004 DEFB104AQ8WTQ1 72 aa13.04□□□□□ -0.32
HLA-DRB1-201ENST00000360004 UBE2L6O14933 153 aa13.03□□□□□ -0.32
HLA-DRB1-201ENST00000360004 AMTP48728 403 aa13.03□□□□□ -0.32
HLA-DRB1-201ENST00000360004 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
HLA-DRB1-201ENST00000360004 KRTAP1-5Q9BYS1 174 aa13.03□□□□□ -0.32
HLA-DRB1-201ENST00000360004 TRAV9-1A0A075B6T8 112 aa13.02□□□□□ -0.33
HLA-DRB1-201ENST00000360004 TMEM243Q9BU79 118 aa13.02□□□□□ -0.33
HLA-DRB1-201ENST00000360004 TMEM242Q9NWH2 141 aa13.02□□□□□ -0.33
HLA-DRB1-201ENST00000360004 TRBV6-5A0A0K0K1A5 114 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 I3L3M4 83 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 APCSP02743 223 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 ELOBQ15370 118 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 NIT1Q86X76 327 aa13.01□□□□□ -0.33
HLA-DRB1-201ENST00000360004 D6R8Y8 96 aa13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 GAGE6Q13070 117 aa13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 CHCHD7Q9BUK0 85 aa13□□□□□ -0.33
HLA-DRB1-201ENST00000360004 PPBPP02775 128 aa12.99□□□□□ -0.33
HLA-DRB1-201ENST00000360004 IQCJQ1A5X6 159 aa12.99□□□□□ -0.33
HLA-DRB1-201ENST00000360004 Q9HAA7 133 aa12.99□□□□□ -0.33
HLA-DRB1-201ENST00000360004 KMT2AQ03164 3969 aa12.98□□□□□ -0.33
HLA-DRB1-201ENST00000360004 PRSS29PA6NIE9 313 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms