RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PROK2Q9HC23 129 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 PDE6GP18545 87 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
COL6A6-201ENST00000358511 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 KAAG1Q9UBP8 84 aa6.83□□□□□ -1.32
COL6A6-201ENST00000358511 MSRB1Q9NZV6 116 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 CTSGP08311 255 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 DAND5Q8N907 189 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 IGLV3-9A0A075B6K5 115 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 MIAQ16674 131 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 HIVEP2P31629 2446 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 IGKV1-17P01599 117 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 DAZ2Q13117 558 aaKnown RBP6.82□□□□□ -1.32
COL6A6-201ENST00000358511 DAZ4Q86SG3 579 aaKnown RBP6.82□□□□□ -1.32
COL6A6-201ENST00000358511 DAZ3Q9NR90 486 aaKnown RBP6.82□□□□□ -1.32
COL6A6-201ENST00000358511 IGLC6P0CF74 106 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
COL6A6-201ENST00000358511 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
COL6A6-201ENST00000358511 HIVEP3Q5T1R4 2406 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 XCL1P47992 114 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 DIAPH2-AS1Q14236 149 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 E7EQL1 145 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 I3L2K1 104 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 PATE2Q6UY27 113 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 P0DMU3 169 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 FAM231AP0DMU4 169 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 FAM231CP0DMU5 169 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 K7EIM0 57 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 C9orf47Q6ZRZ4 202 aa6.81□□□□□ -1.32
COL6A6-201ENST00000358511 H3BUA1 57 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 TRAV23DV6A0A075B6W5 121 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 GATA3P23771 443 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 GDF5OSQ5U4N7 250 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 C11orf53Q8IXP5 236 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 UBE2D4Q9Y2X8 147 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 LECT2O14960 151 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 Q6ZS92 163 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 NREPQ16612 68 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 TP53TG3Q9ULZ0 132 aa6.8□□□□□ -1.32
COL6A6-201ENST00000358511 P0C879 139 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 COX7A2LO14548 114 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 LY6HO94772 140 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 BPESC1Q9GZL8 116 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 LINC01619G3V211 115 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 CXCL5P42830 114 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 NDUFC1O43677 76 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 IGLV2-23P01705 113 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 IGHV3-30-3P0DP02 117 aa6.79□□□□□ -1.32
COL6A6-201ENST00000358511 BUB3O43684 328 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 HIST2H2BCQ6DN03 193 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 NPBQ8NG41 125 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 IGLV11-55A0A075B6I3 123 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 IGLV2-8P01709 118 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 WI2-2373I1.2A0A1W2PRP0 233 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 C16orf54Q6UWD8 224 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 PKD1L2Q7Z442 2459 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 CCDC179H3BU77 68 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 FGF23Q9GZV9 251 aaPredicted RBP6.78□□□□□ -1.32
COL6A6-201ENST00000358511 MDFICQ9P1T7 246 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 TRBV7-3A0A075B6L6 115 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 IGHV4-59P01825 116 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
COL6A6-201ENST00000358511 HIGD2BQ4VC39 106 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 SRCAPQ6ZRS2 3230 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 PRYO14603 147 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 COLQQ9Y215 455 aaPredicted RBP6.77□□□□□ -1.33
COL6A6-201ENST00000358511 K7EQD1 137 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 LINC01356Q8N9X3 169 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 NEXN-AS1Q8NBZ9 246 aa6.77□□□□□ -1.33
COL6A6-201ENST00000358511 RUSC1-AS1Q66K80 236 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 U3KQK5 164 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 F8P00451 2351 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
COL6A6-201ENST00000358511 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 HIST2H2BDQ6DRA6 164 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 LRRC75A-AS1Q8N1F1 130 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 TRBV30A0A0K0K1B3 111 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 TRIAP1O43715 76 aa6.76□□□□□ -1.33
COL6A6-201ENST00000358511 MRPL36Q9P0J6 103 aaKnown RBP6.75□□□□□ -1.33
COL6A6-201ENST00000358511 XGP55808 180 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 MLST8Q9BVC4 326 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 NOP10Q9NPE3 64 aaKnown RBP6.75□□□□□ -1.33
COL6A6-201ENST00000358511 TRBV12-3P01733 135 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms