RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.89
RTFDC1-202ENST00000357348 IGHV4OR15-8A0A075B7B6 117 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 A0A087WW49 117 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 EDN2P20800 178 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 LINC00477Q96M19 166 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 C16orf95Q9H693 158 aa9.46□□□□□ -0.9
RTFDC1-202ENST00000357348 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 APOMO95445 188 aa9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 CD7P09564 240 aa9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 GLMPQ8WWB7 406 aa9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
RTFDC1-202ENST00000357348 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 TSPAN13O95857 204 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 PPP1R17O96001 155 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 GPHB5Q86YW7 130 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 SBSPONQ8IVN8 264 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 MTURNQ8N3F0 131 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
RTFDC1-202ENST00000357348 LINC01549A6NIU2 74 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 CRYGDP07320 174 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 SLURP1P55000 103 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 PROK1P58294 105 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 NXPH4O95158 308 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 NDUFA7O95182 113 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 SYNJ2BPP57105 145 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
RTFDC1-202ENST00000357348 SOCS3O14543 225 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 ASIPP42127 132 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 CKS1BP61024 79 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 NSUN5P1Q3KNT7 163 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 PAPPA-AS1Q5QFB9 102 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
RTFDC1-202ENST00000357348 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 TRBV7-9A0A0J9YWB2 115 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 NDUFA4O00483 81 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 OVOL1O14753 267 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 A0A0J9YY99 117 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 TSHBP01222 138 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
RTFDC1-202ENST00000357348 IGIPA6NJ69 53 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 CRYBA4P53673 196 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 LINC00315P59091 139 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 NDUFA11Q86Y39 141 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 SYT8Q8NBV8 401 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 VCX2Q9H322 139 aa9.4□□□□□ -0.9
RTFDC1-202ENST00000357348 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.91
RTFDC1-202ENST00000357348 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.91
RTFDC1-202ENST00000357348 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
RTFDC1-202ENST00000357348 TRBV20-1A0A075B6N2 111 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 C11orf86A6NJI1 115 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 FHL3Q13643 280 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 VWFP04275 2813 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
RTFDC1-202ENST00000357348 M0QXV9 152 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 PSMB2P49721 201 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 HERVK_113P61574 105 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 PRIMA1Q86XR5 153 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
RTFDC1-202ENST00000357348 PMVKQ15126 192 aa9.37□□□□□ -0.91
RTFDC1-202ENST00000357348 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
RTFDC1-202ENST00000357348 AMELXQ99217 191 aa9.37□□□□□ -0.91
RTFDC1-202ENST00000357348 SORL1Q92673 2214 aa9.37□□□□□ -0.91
RTFDC1-202ENST00000357348 SPRY2O43597 315 aa9.37□□□□□ -0.91
RTFDC1-202ENST00000357348 MGPP08493 103 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms