RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 ZNF580Q9UK33 172 aa13.27□□□□□ -0.28
KDM1A-201ENST00000356634 AMELXQ99217 191 aa13.27□□□□□ -0.29
KDM1A-201ENST00000356634 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
KDM1A-201ENST00000356634 KIF25-AS1Q9Y6Z4 181 aa13.26□□□□□ -0.29
KDM1A-201ENST00000356634 C5orf56Q8N8D9 126 aa13.26□□□□□ -0.29
KDM1A-201ENST00000356634 NPC2P61916 151 aa13.26□□□□□ -0.29
KDM1A-201ENST00000356634 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
KDM1A-201ENST00000356634 NBL1P41271 181 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 ATXN8Q156A1 80 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 CITED1Q99966 193 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 IGHV4OR15-8A0A075B7B6 117 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 A0A087WW49 117 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 A0A0J9YXV3 536 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 MED14OSP0DP75 135 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 NDUFV3P56181 108 aaKnown RBP13.25□□□□□ -0.29
KDM1A-201ENST00000356634 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
KDM1A-201ENST00000356634 TRAV8-4A0A0B4J246 113 aa13.24□□□□□ -0.29
KDM1A-201ENST00000356634 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
KDM1A-201ENST00000356634 SPXQ9BT56 116 aa13.24□□□□□ -0.29
KDM1A-201ENST00000356634 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
KDM1A-201ENST00000356634 NHLRC4P0CG21 123 aaPredicted RBP13.24□□□□□ -0.29
KDM1A-201ENST00000356634 RHODO00212 210 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 SOCS3O14543 225 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 PF4V1P10720 104 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 MYO9AB2RTY4 2548 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 PTPN13Q12923 2485 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 TRAV12-2A0A075B6T6 113 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 CCDC179H3BU77 68 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 NPFFO15130 113 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 LEPROTO15243 131 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 LY6EQ16553 131 aa13.23□□□□□ -0.29
KDM1A-201ENST00000356634 IFITM1P13164 125 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
KDM1A-201ENST00000356634 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
KDM1A-201ENST00000356634 NDUFA4O00483 81 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE12JA6NER3 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE7O76087 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE12FP0CL80 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE12GP0CL81 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE12IP0CL82 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
KDM1A-201ENST00000356634 EDN2P20800 178 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 GAGE4Q13068 117 aa13.21□□□□□ -0.29
KDM1A-201ENST00000356634 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.29
KDM1A-201ENST00000356634 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.3
KDM1A-201ENST00000356634 TRIAP1O43715 76 aa13.21□□□□□ -0.3
KDM1A-201ENST00000356634 C2orf82Q6UX34 121 aa13.21□□□□□ -0.3
KDM1A-201ENST00000356634 MDFICQ9P1T7 246 aa13.21□□□□□ -0.3
KDM1A-201ENST00000356634 A0A0B4J2C4 111 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
KDM1A-201ENST00000356634 IGSF10Q6WRI0 2623 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 H3BMM0 161 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 C11orf71Q6IPW1 123 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 UBE2WQ96B02 151 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
KDM1A-201ENST00000356634 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
KDM1A-201ENST00000356634 FAM19A4Q96LR4 140 aa13.19□□□□□ -0.3
KDM1A-201ENST00000356634 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 A0A0J9YXY3 114 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 NXPH4O95158 308 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 P0DMU3 169 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 FAM231AP0DMU4 169 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 FAM231CP0DMU5 169 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 HTN1P15515 57 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 RPL32P62910 135 aaKnown RBP13.18□□□□□ -0.3
KDM1A-201ENST00000356634 Q6ZSV7 163 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 M0R2P5 195 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 CCDC168Q8NDH2 2452 aa13.18□□□□□ -0.3
KDM1A-201ENST00000356634 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
KDM1A-201ENST00000356634 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
KDM1A-201ENST00000356634 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
KDM1A-201ENST00000356634 TIMM21Q9BVV7 248 aa13.17□□□□□ -0.3
KDM1A-201ENST00000356634 TRBV10-2A0A0K0K1G8 114 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
KDM1A-201ENST00000356634 KLLNB2CW77 178 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 M0QY20 66 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 IGHV3-30-3P0DP02 117 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
KDM1A-201ENST00000356634 LGALS9O00182 355 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 CD28P10747 220 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 A8MZ25 164 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 DUX3Q96PT4 197 aa13.15□□□□□ -0.3
KDM1A-201ENST00000356634 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
KDM1A-201ENST00000356634 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
KDM1A-201ENST00000356634 IGHV1-69P01742 117 aa13.14□□□□□ -0.31
KDM1A-201ENST00000356634 ID1P41134 155 aa13.14□□□□□ -0.31
KDM1A-201ENST00000356634 COX6CP09669 75 aa13.14□□□□□ -0.31
KDM1A-201ENST00000356634 FBXL19-AS1Q494R0 122 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms