RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
RXRA-201ENST00000356384 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
RXRA-201ENST00000356384 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
RXRA-201ENST00000356384 KLK5Q9Y337 293 aaPredicted RBP12.3□□□□□ -0.44
RXRA-201ENST00000356384 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
RXRA-201ENST00000356384 NFE4Q86UQ8 179 aa12.3□□□□□ -0.44
RXRA-201ENST00000356384 K7EMT4 169 aa12.3□□□□□ -0.44
RXRA-201ENST00000356384 TRAV23DV6A0A075B6W5 121 aa12.3□□□□□ -0.44
RXRA-201ENST00000356384 MED14OSP0DP75 135 aa12.29□□□□□ -0.44
RXRA-201ENST00000356384 ODF1Q14990 250 aa12.29□□□□□ -0.44
RXRA-201ENST00000356384 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
RXRA-201ENST00000356384 MYCNOSP40205 109 aa12.29□□□□□ -0.44
RXRA-201ENST00000356384 CTRLP40313 264 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 CASC2Q6XLA1 102 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 C4orf3Q8WVX3 66 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 A0A096LNI7 61 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 BPY2O14599 106 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
RXRA-201ENST00000356384 Q6ZUT4 128 aa12.27□□□□□ -0.45
RXRA-201ENST00000356384 C20orf203Q8NBC4 194 aa12.27□□□□□ -0.45
RXRA-201ENST00000356384 PRO0255Q9UI72 69 aa12.27□□□□□ -0.45
RXRA-201ENST00000356384 ZFP36P26651 326 aaKnown RBP12.27□□□□□ -0.45
RXRA-201ENST00000356384 PLXNA2O75051 1894 aa12.26□□□□□ -0.45
RXRA-201ENST00000356384 TMEM263Q8WUH6 116 aaKnown RBP12.26□□□□□ -0.45
RXRA-201ENST00000356384 NUP210Q8TEM1 1887 aaPredicted RBP12.26□□□□□ -0.45
RXRA-201ENST00000356384 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
RXRA-201ENST00000356384 PDE6GP18545 87 aa12.26□□□□□ -0.45
RXRA-201ENST00000356384 UNQ9165/PRO28630Q6UXU0 137 aa12.26□□□□□ -0.45
RXRA-201ENST00000356384 ZGRF1Q86YA3 2104 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 SIRPDQ9H106 197 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 MUC6Q6W4X9 2439 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 E7EUB6 86 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 Q8N7P7 452 aa12.25□□□□□ -0.45
RXRA-201ENST00000356384 MPLKIPQ8TAP9 179 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 MIAQ16674 131 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 LRCOL1A6NCL2 159 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 TCL1BO95988 128 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 P0DMU3 169 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
RXRA-201ENST00000356384 TNCP24821 2201 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 A0A0J9YX75 114 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 TRBV6-1A0A0K0K1D8 114 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 G3V4G9 280 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 ADORA2A-AS1P86434 159 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 LINC00643Q86TS7 51 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 GOLGB1Q14789 3259 aaKnown RBP12.23□□□□□ -0.45
RXRA-201ENST00000356384 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
RXRA-201ENST00000356384 MED13Q9UHV7 2174 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 LTBP2Q14767 1821 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 LINC00269Q8N2A0 174 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 HELZP42694 1942 aaKnown RBP12.22□□□□□ -0.45
RXRA-201ENST00000356384 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 IGFL2Q6UWQ7 119 aa12.22□□□□□ -0.45
RXRA-201ENST00000356384 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
RXRA-201ENST00000356384 SCXQ7RTU7 201 aa12.21□□□□□ -0.45
RXRA-201ENST00000356384 C20orf197Q8N268 126 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 IGLV1-47P01700 117 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 UFSP1Q6NVU6 142 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 LOXL1Q08397 574 aaPredicted RBP12.2□□□□□ -0.46
RXRA-201ENST00000356384 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 ODF3L1Q8IXM7 274 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 A0A0J9YXY3 114 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 REG3AQ06141 175 aa12.2□□□□□ -0.46
RXRA-201ENST00000356384 KIAA1671Q9BY89 1806 aa12.19□□□□□ -0.46
RXRA-201ENST00000356384 TMEM89A2RUT3 159 aa12.19□□□□□ -0.46
RXRA-201ENST00000356384 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
RXRA-201ENST00000356384 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
RXRA-201ENST00000356384 Q6ZTI0 123 aa12.18□□□□□ -0.46
RXRA-201ENST00000356384 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
RXRA-201ENST00000356384 C3orf22Q8N5N4 141 aa12.18□□□□□ -0.46
RXRA-201ENST00000356384 C19orf71A6NCJ1 209 aa12.18□□□□□ -0.46
RXRA-201ENST00000356384 TNRC6BQ9UPQ9 1833 aaKnown RBP12.17□□□□□ -0.46
RXRA-201ENST00000356384 A0A087WZ39 114 aa12.17□□□□□ -0.46
RXRA-201ENST00000356384 SLPIP03973 132 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 IGLV2-14P01704 120 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 ZNF80P51504 273 aaPredicted RBP12.16□□□□□ -0.46
RXRA-201ENST00000356384 INSL3P51460 131 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 TEX49A0A1B0GTD5 131 aa12.16□□□□□ -0.46
RXRA-201ENST00000356384 LYPD6Q86Y78 171 aa12.15□□□□□ -0.46
RXRA-201ENST00000356384 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
RXRA-201ENST00000356384 A6NDX4 124 aa12.15□□□□□ -0.46
RXRA-201ENST00000356384 DAZAP2Q15038 168 aaPredicted RBP12.15□□□□□ -0.46
RXRA-201ENST00000356384 Q6ZSR3 168 aa12.15□□□□□ -0.46
RXRA-201ENST00000356384 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.47
RXRA-201ENST00000356384 K7ERS5 55 aa12.15□□□□□ -0.47
RXRA-201ENST00000356384 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.47
RXRA-201ENST00000356384 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms