RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 UBTD1Q9HAC8 227 aa11.37□□□□□ -0.59
VAT1-201ENST00000355653 PRSS2P07478 247 aa11.36□□□□□ -0.59
VAT1-201ENST00000355653 EDN2P20800 178 aa11.36□□□□□ -0.59
VAT1-201ENST00000355653 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
VAT1-201ENST00000355653 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
VAT1-201ENST00000355653 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 MOB4Q9Y3A3 225 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 A0A1W2PPR1 153 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 P0DMU3 169 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 NPC2P61916 151 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 SPXQ9BT56 116 aa11.35□□□□□ -0.59
VAT1-201ENST00000355653 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 TRIAP1O43715 76 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 BRD3OSQ6XYD6 125 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
VAT1-201ENST00000355653 PF4V1P10720 104 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 IFITM1P13164 125 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 LY6EQ16553 131 aa11.34□□□□□ -0.59
VAT1-201ENST00000355653 KLLNB2CW77 178 aa11.33□□□□□ -0.6
VAT1-201ENST00000355653 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
VAT1-201ENST00000355653 LGALS9O00182 355 aa11.33□□□□□ -0.6
VAT1-201ENST00000355653 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
VAT1-201ENST00000355653 IGHV1-69P01742 117 aa11.32□□□□□ -0.6
VAT1-201ENST00000355653 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
VAT1-201ENST00000355653 H3BMM0 161 aa11.32□□□□□ -0.6
VAT1-201ENST00000355653 M0QY20 66 aa11.32□□□□□ -0.6
VAT1-201ENST00000355653 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
VAT1-201ENST00000355653 GAGE12JA6NER3 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 GAGE7O76087 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 GAGE4Q13068 117 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 Q6ZSV7 163 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 TRAV8-3A0A0A6YYJ7 113 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 M0QXV9 152 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 M0R2P5 195 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 NSUN5P1Q3KNT7 163 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 C19orf54Q5BKX5 351 aa11.31□□□□□ -0.6
VAT1-201ENST00000355653 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
VAT1-201ENST00000355653 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
VAT1-201ENST00000355653 TRBV10-2A0A0K0K1G8 114 aa11.3□□□□□ -0.6
VAT1-201ENST00000355653 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
VAT1-201ENST00000355653 C20orf203Q8NBC4 194 aa11.3□□□□□ -0.6
VAT1-201ENST00000355653 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 RHOHQ15669 191 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
VAT1-201ENST00000355653 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
VAT1-201ENST00000355653 DAZ1Q9NQZ3 744 aaKnown RBP11.29□□□□□ -0.6
VAT1-201ENST00000355653 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 IGHV3-73A0A0B4J1V6 119 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 CD28P10747 220 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 ICOSQ9Y6W8 199 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 SORL1Q92673 2214 aa11.29□□□□□ -0.6
VAT1-201ENST00000355653 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 ID1P41134 155 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 LMO4P61968 165 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 A8MZ25 164 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 I3L3M4 83 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
VAT1-201ENST00000355653 H7C423 109 aa11.27□□□□□ -0.61
VAT1-201ENST00000355653 RPL13AP40429 203 aaKnown RBP11.27□□□□□ -0.61
VAT1-201ENST00000355653 KLRB1Q12918 225 aa11.27□□□□□ -0.61
VAT1-201ENST00000355653 C9orf85Q96MD7 179 aa11.27□□□□□ -0.61
VAT1-201ENST00000355653 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
VAT1-201ENST00000355653 HTN1P15515 57 aa11.26□□□□□ -0.61
VAT1-201ENST00000355653 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
VAT1-201ENST00000355653 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
VAT1-201ENST00000355653 BLCAPP62952 87 aa11.26□□□□□ -0.61
VAT1-201ENST00000355653 LITAFQ99732 161 aa11.26□□□□□ -0.61
VAT1-201ENST00000355653 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
VAT1-201ENST00000355653 A0A0J9YX75 114 aa11.25□□□□□ -0.61
VAT1-201ENST00000355653 COX6CP09669 75 aa11.25□□□□□ -0.61
VAT1-201ENST00000355653 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
VAT1-201ENST00000355653 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
VAT1-201ENST00000355653 SMIM20Q8N5G0 67 aa11.24□□□□□ -0.61
VAT1-201ENST00000355653 DAND5Q8N907 189 aa11.24□□□□□ -0.61
VAT1-201ENST00000355653 H3BUX3 64 aa11.23□□□□□ -0.61
VAT1-201ENST00000355653 HERV-K104P63124 156 aa11.23□□□□□ -0.61
VAT1-201ENST00000355653 Q6Q795 121 aa11.23□□□□□ -0.61
VAT1-201ENST00000355653 ABCA2Q9BZC7 2435 aa11.23□□□□□ -0.61
VAT1-201ENST00000355653 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
VAT1-201ENST00000355653 PROK1P58294 105 aa11.22□□□□□ -0.61
VAT1-201ENST00000355653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.611e-7■□□□□ 9.8
VAT1-201ENST00000355653 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
VAT1-201ENST00000355653 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
VAT1-201ENST00000355653 IGHG2P01859 326 aa11.21□□□□□ -0.62
VAT1-201ENST00000355653 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.62
VAT1-201ENST00000355653 MIAQ16674 131 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms