RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 BDP1A6H8Y1 2624 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 CHKB-CPT1BH3BT56 60 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 CITED1Q99966 193 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 NACAE9PAV3 2078 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 IGHV4-31P0DP07 118 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 CXCL5P42830 114 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
SCN8A-202ENST00000355133 IGKV2-24A0A0C4DH68 120 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 IGKV1D-37A0A075B6S9 117 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 COA6Q5JTJ3 125 aaKnown RBP10.03□□□□□ -0.8
SCN8A-202ENST00000355133 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 ADAMTS9Q9P2N4 1935 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 ACYP1P07311 99 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 Q6ZTI0 123 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
SCN8A-202ENST00000355133 E9PLD3 99 aa10.02□□□□□ -0.8
SCN8A-202ENST00000355133 Q6ZUT4 128 aa10.02□□□□□ -0.8
SCN8A-202ENST00000355133 ZNF80P51504 273 aaPredicted RBP10.02□□□□□ -0.81
SCN8A-202ENST00000355133 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
SCN8A-202ENST00000355133 PLA2G5P39877 138 aa10.02□□□□□ -0.81
SCN8A-202ENST00000355133 TRBV6-1A0A0K0K1D8 114 aa10.02□□□□□ -0.81
SCN8A-202ENST00000355133 LGALS9O00182 355 aa10.02□□□□□ -0.81
SCN8A-202ENST00000355133 Q6YL49 198 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 C22orf34Q6ZV56 151 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 PLXNB3Q9ULL4 1909 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 A0A0B4J2C4 111 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 LRRC75A-AS1Q8N1F1 130 aa10.01□□□□□ -0.81
SCN8A-202ENST00000355133 NFE4Q86UQ8 179 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 C19orf71A6NCJ1 209 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 LINC00269Q8N2A0 174 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 A0A1B0GX51 115 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 WFDC9Q8NEX5 89 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 TMEM258P61165 79 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 ODF1Q14990 250 aa10□□□□□ -0.81
SCN8A-202ENST00000355133 FAM222AQ5U5X8 452 aa9.99□□□□□ -0.81
SCN8A-202ENST00000355133 CHD3Q12873 2000 aaKnown RBP9.99□□□□□ -0.81
SCN8A-202ENST00000355133 MP68P56378 58 aa9.99□□□□□ -0.81
SCN8A-202ENST00000355133 TNCP24821 2201 aa9.99□□□□□ -0.81
SCN8A-202ENST00000355133 TECTAO75443 2155 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 FAM110AQ9BQ89 295 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 PSMB8P28062 276 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 C1orf229Q6ZS94 237 aaPredicted RBP9.98□□□□□ -0.81
SCN8A-202ENST00000355133 C14orf132Q9NPU4 83 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 WFDC2Q14508 124 aa9.98□□□□□ -0.81
SCN8A-202ENST00000355133 HIGD1BQ9P298 99 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 H3BQ85 93 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 REG3AQ06141 175 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 H0Y9J4 135 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 DEFB114Q30KQ6 69 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 LINC00322Q6ZN03 302 aaPredicted RBP9.97□□□□□ -0.81
SCN8A-202ENST00000355133 B5MCH6 92 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 COX7BP24311 80 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 C20orf173Q96LM9 149 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 B9D2Q9BPU9 175 aa9.97□□□□□ -0.81
SCN8A-202ENST00000355133 LINC00482Q8N8I6 264 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 RNF183Q96D59 192 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 COL4A3Q01955 1670 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 ZFAND2AQ8N6M9 145 aa9.96□□□□□ -0.81
SCN8A-202ENST00000355133 IGF1P05019 195 aa9.96□□□□□ -0.82
SCN8A-202ENST00000355133 BRWD1-AS2P59051 145 aa9.96□□□□□ -0.82
SCN8A-202ENST00000355133 JMJD7-PLA2G4BH0Y9G9 81 aa9.96□□□□□ -0.82
SCN8A-202ENST00000355133 P0C879 139 aa9.96□□□□□ -0.82
SCN8A-202ENST00000355133 HIVEP2P31629 2446 aa9.96□□□□□ -0.82
SCN8A-202ENST00000355133 TEN1Q86WV5 123 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 CRYGDP07320 174 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 NOTCH2Q04721 2471 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
SCN8A-202ENST00000355133 K7EQG2 157 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 LRCOL1A6NCL2 159 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 Q6ZPA2 131 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 HILS1P60008 231 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 SS18L2Q9UHA2 77 aa9.94□□□□□ -0.82
SCN8A-202ENST00000355133 TNRC6BQ9UPQ9 1833 aaKnown RBP9.94□□□□□ -0.82
SCN8A-202ENST00000355133 A0A096LNI7 61 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 Q6ZSV7 163 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 CHCHD10Q8WYQ3 142 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms