RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZNF491Q8N8L2 437 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 DENND4CQ5VZ89 1909 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.56□□□□□ -1.041e-10■■■■□ 23.8
SMARCE1-202ENST00000348513 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRR20EP86478 221 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRR20CP86479 221 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRR20DP86480 221 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRR20BP86481 221 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 PRR20AP86496 221 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 Q6JHZ5 121 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 A0A1B0GXF2 115 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 CGB7P0DN87 165 aa8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 WISP2O76076 250 aa8.55□□□□□ -1.04
SMARCE1-202ENST00000348513 IGFL2Q6UWQ7 119 aa8.55□□□□□ -1.04
SMARCE1-202ENST00000348513 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
SMARCE1-202ENST00000348513 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
SMARCE1-202ENST00000348513 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
SMARCE1-202ENST00000348513 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
SMARCE1-202ENST00000348513 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SMARCE1-202ENST00000348513 CFHR4Q92496 578 aa8.54□□□□□ -1.04
SMARCE1-202ENST00000348513 MED13LQ71F56 2210 aa8.54□□□□□ -1.04
SMARCE1-202ENST00000348513 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 LHBP01229 141 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 Q9HAA7 133 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 CRYGAP11844 174 aa8.53□□□□□ -1.04
SMARCE1-202ENST00000348513 TRIAP1O43715 76 aa8.52□□□□□ -1.04
SMARCE1-202ENST00000348513 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.04
SMARCE1-202ENST00000348513 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 ADAMTS9Q9P2N4 1935 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 IGHV7-81A0A0B4J1V7 117 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 XCL1P47992 114 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 C5orf38Q86SI9 138 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 MALRD1Q5VYJ5 2156 aa8.52□□□□□ -1.05
SMARCE1-202ENST00000348513 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 CD164Q04900 197 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 SEM1Q6ZVN7 128 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 Q9H8V8 135 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 H3BUA1 57 aa8.51□□□□□ -1.05
SMARCE1-202ENST00000348513 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 LINC00310P59036 64 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 DYSFO75923 2080 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 TRAV7A0A075B6U4 112 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
SMARCE1-202ENST00000348513 MIFP14174 115 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 GP9P14770 177 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 MIAQ16674 131 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 MED13Q9UHV7 2174 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 H7C423 109 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 LECT2O14960 151 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 NREPQ16612 68 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 DAND5Q8N907 189 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 KMT2EQ8IZD2 1858 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 IGHV4OR15-8A0A075B7B6 117 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 A0A087WW49 117 aa8.49□□□□□ -1.05
SMARCE1-202ENST00000348513 WI2-2373I1.2A0A1W2PRP0 233 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 PLAC8L1A1L4L8 177 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 ATRXP46100 2492 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 MUC6Q6W4X9 2439 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 PDE6GP18545 87 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 NPBQ8NG41 125 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
SMARCE1-202ENST00000348513 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
SMARCE1-202ENST00000348513 I3L2K1 104 aa8.47□□□□□ -1.05
SMARCE1-202ENST00000348513 KRTAP27-1Q3LI81 207 aa8.47□□□□□ -1.05
SMARCE1-202ENST00000348513 K7EIM0 57 aa8.47□□□□□ -1.05
SMARCE1-202ENST00000348513 DEFB4AO15263 64 aa8.47□□□□□ -1.05
SMARCE1-202ENST00000348513 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 IGHV3-30P01768 117 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 IGHV3-30-5P0DP03 117 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 C5orf56Q8N8D9 126 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 RMI2Q96E14 147 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 C2orf16Q68DN1 1984 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 PLXNB3Q9ULL4 1909 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 DEFB1P60022 68 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 Q8N9W7 124 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 FAM208BQ5VWN6 2430 aa8.46□□□□□ -1.05
SMARCE1-202ENST00000348513 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 IGHV3-30-3P0DP02 117 aa8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 COL4A3Q01955 1670 aa8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 NCKAP5O14513 1909 aa8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 EML6Q6ZMW3 1958 aa8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 MRPL36Q9P0J6 103 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-202ENST00000348513 LST1O00453 97 aa8.45□□□□□ -1.06
SMARCE1-202ENST00000348513 TIRAPP58753 221 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms