RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CRIP1P50238 77 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 CFAP126Q5VTH2 177 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 UBE2DNLQ8IWF7 75 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 NREPQ16612 68 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 DEFB105AQ8NG35 78 aa13.31□□□□□ -0.28
SPAST-202ENST00000345662 HIST2H2BDQ6DRA6 164 aa13.3□□□□□ -0.28
SPAST-202ENST00000345662 Q6ZQT7 251 aa13.3□□□□□ -0.28
SPAST-202ENST00000345662 Q8N7P7 452 aa13.3□□□□□ -0.28
SPAST-202ENST00000345662 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
SPAST-202ENST00000345662 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
SPAST-202ENST00000345662 TRBV30A0A0K0K1B3 111 aa13.29□□□□□ -0.28
SPAST-202ENST00000345662 IGHV4-59P01825 116 aa13.29□□□□□ -0.28
SPAST-202ENST00000345662 IGHV3-33P01772 117 aa13.29□□□□□ -0.28
SPAST-202ENST00000345662 RNF185Q96GF1 192 aa13.29□□□□□ -0.28
SPAST-202ENST00000345662 BLCAPP62952 87 aa13.29□□□□□ -0.28
SPAST-202ENST00000345662 TRIAP1O43715 76 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 CEMP1Q6PRD7 247 aaPredicted RBP13.28□□□□□ -0.28
SPAST-202ENST00000345662 DEFB112Q30KQ8 113 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 BRK1Q8WUW1 75 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 XGP55808 180 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
SPAST-202ENST00000345662 DEFB136Q30KP8 78 aa13.27□□□□□ -0.28
SPAST-202ENST00000345662 SDIM1Q6ZPB5 146 aa13.27□□□□□ -0.28
SPAST-202ENST00000345662 C16orf74Q96GX8 76 aa13.27□□□□□ -0.28
SPAST-202ENST00000345662 TMEM223A0PJW6 202 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.29
SPAST-202ENST00000345662 APOC4P55056 127 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 CLUHP3Q96NS8 147 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 ZNF22P17026 224 aaPredicted RBP13.27□□□□□ -0.29
SPAST-202ENST00000345662 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
SPAST-202ENST00000345662 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
SPAST-202ENST00000345662 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 C20orf197Q8N268 126 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 MED12LQ86YW9 2145 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 SEM1Q6ZVN7 128 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 PDE6GP18545 87 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 SLURP1P55000 103 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
SPAST-202ENST00000345662 GPHB5Q86YW7 130 aa13.25□□□□□ -0.29
SPAST-202ENST00000345662 MP68P56378 58 aa13.25□□□□□ -0.29
SPAST-202ENST00000345662 GYPEP15421 78 aa13.25□□□□□ -0.29
SPAST-202ENST00000345662 INSL3P51460 131 aa13.25□□□□□ -0.29
SPAST-202ENST00000345662 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
SPAST-202ENST00000345662 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
SPAST-202ENST00000345662 A0A0J9YX75 114 aa13.24□□□□□ -0.29
SPAST-202ENST00000345662 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
SPAST-202ENST00000345662 UPK3BQ9BT76 320 aa13.24□□□□□ -0.29
SPAST-202ENST00000345662 IMUPQ9GZP8 106 aa13.24□□□□□ -0.29
SPAST-202ENST00000345662 NCR3O14931 201 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 NDUFA7O95182 113 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 IGHV4-38-2P0DP08 117 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 CXCL5P42830 114 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 PCNX3Q9H6A9 2034 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 IGHV3-30P01768 117 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 IGHV3-30-5P0DP03 117 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 FAM236DA0A1B0GTK5 79 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 CCDC179H3BU77 68 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 FAM236CP0DP71 79 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 CCDC140Q96MF4 163 aa13.23□□□□□ -0.29
SPAST-202ENST00000345662 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
SPAST-202ENST00000345662 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
SPAST-202ENST00000345662 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.3
SPAST-202ENST00000345662 ATP5EP2Q5VTU8 51 aa13.21□□□□□ -0.3
SPAST-202ENST00000345662 PRB2P02812 416 aaPredicted RBP13.2□□□□□ -0.3
SPAST-202ENST00000345662 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
SPAST-202ENST00000345662 TRBV12-3P01733 135 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 HIGD2BQ4VC39 106 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 RMI2Q96E14 147 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 A0A087WW49 117 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 CCL24O00175 119 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 CDKN2A-AS1Q9UH64 79 aa13.2□□□□□ -0.3
SPAST-202ENST00000345662 LINC00308Q8TCZ7 52 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 IGHV4-61A0A0C4DH41 118 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 URB1-AS1Q96HZ7 61 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
SPAST-202ENST00000345662 DIRC1Q969H9 104 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
SPAST-202ENST00000345662 UBE2BP63146 152 aa13.18□□□□□ -0.3
SPAST-202ENST00000345662 IGKV2D-24A0A075B6R9 120 aa13.18□□□□□ -0.3
SPAST-202ENST00000345662 SP5Q6BEB4 398 aaPredicted RBP13.18□□□□□ -0.3
SPAST-202ENST00000345662 NRACQ8N912 160 aa13.18□□□□□ -0.3
SPAST-202ENST00000345662 Q96MF0 132 aa13.17□□□□□ -0.3
SPAST-202ENST00000345662 SIRPDQ9H106 197 aa13.17□□□□□ -0.3
SPAST-202ENST00000345662 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
SPAST-202ENST00000345662 NDUFS5O43920 106 aa13.16□□□□□ -0.3
SPAST-202ENST00000345662 IGF1P05019 195 aa13.16□□□□□ -0.3
SPAST-202ENST00000345662 SERP2Q8N6R1 65 aa13.15□□□□□ -0.3
SPAST-202ENST00000345662 Q6Q795 121 aa13.15□□□□□ -0.3
SPAST-202ENST00000345662 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms