RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ATRQ13535 2644 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 CFHR3Q02985 330 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 FOXI2Q6ZQN5 318 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 PIFOQ8TCI5 191 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 TMEM190Q8WZ59 177 aa9.44□□□□□ -0.9
LMX1A-202ENST00000342310 CD28P10747 220 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 ZNF48Q96MX3 618 aaPredicted RBP9.43□□□□□ -0.9
LMX1A-202ENST00000342310 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
LMX1A-202ENST00000342310 DAND5Q8N907 189 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 TNFRSF18Q9Y5U5 241 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 UBR5O95071 2799 aaPredicted RBP9.43□□□□□ -0.9
LMX1A-202ENST00000342310 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 A6NJY4 79 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 A8MZ25 164 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 C9JAW5 83 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
LMX1A-202ENST00000342310 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 IGHV4OR15-8A0A075B7B6 117 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 A0A087WW49 117 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 VCYO14598 125 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 HOXD3P31249 432 aaPredicted RBP9.42□□□□□ -0.9
LMX1A-202ENST00000342310 RRN3P1Q2M238 152 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 GEMIN7Q9H840 131 aaKnown RBP9.42□□□□□ -0.9
LMX1A-202ENST00000342310 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
LMX1A-202ENST00000342310 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
LMX1A-202ENST00000342310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
LMX1A-202ENST00000342310 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
LMX1A-202ENST00000342310 COX6B1P14854 86 aa9.41□□□□□ -0.9
LMX1A-202ENST00000342310 IGHG2P01859 326 aa9.4□□□□□ -0.9
LMX1A-202ENST00000342310 LGALS1P09382 135 aaKnown RBP9.4□□□□□ -0.9
LMX1A-202ENST00000342310 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.9
LMX1A-202ENST00000342310 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
LMX1A-202ENST00000342310 ZNF575Q86XF7 245 aa9.4□□□□□ -0.9
LMX1A-202ENST00000342310 TEP1Q99973 2627 aaKnown RBP9.39□□□□□ -0.91
LMX1A-202ENST00000342310 ATP6V0BQ99437 205 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 SPANXB1Q9NS25 103 aaPredicted RBP9.39□□□□□ -0.91
LMX1A-202ENST00000342310 Q9UF83 564 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 MT-ATP8P03928 68 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 IGHV1OR15-1A0A075B7D0 117 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 F8W1H4 67 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 SIVA1O15304 175 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 PMVKQ15126 192 aa9.39□□□□□ -0.91
LMX1A-202ENST00000342310 TRAV13-1A0A0B4J241 112 aa9.38□□□□□ -0.91
LMX1A-202ENST00000342310 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
LMX1A-202ENST00000342310 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
LMX1A-202ENST00000342310 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
LMX1A-202ENST00000342310 A8MWV9 139 aa9.38□□□□□ -0.91
LMX1A-202ENST00000342310 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
LMX1A-202ENST00000342310 SS18L2Q9UHA2 77 aa9.37□□□□□ -0.91
LMX1A-202ENST00000342310 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
LMX1A-202ENST00000342310 J3QQQ9 107 aa9.37□□□□□ -0.91
LMX1A-202ENST00000342310 TOMM6Q96B49 74 aa9.36□□□□□ -0.91
LMX1A-202ENST00000342310 A6NDX4 124 aa9.36□□□□□ -0.91
LMX1A-202ENST00000342310 RPL35AP18077 110 aaKnown RBP9.36□□□□□ -0.91
LMX1A-202ENST00000342310 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
LMX1A-202ENST00000342310 E9PLD3 99 aa9.36□□□□□ -0.91
LMX1A-202ENST00000342310 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
LMX1A-202ENST00000342310 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
LMX1A-202ENST00000342310 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
LMX1A-202ENST00000342310 SETXQ7Z333 2677 aaKnown RBP9.35□□□□□ -0.91
LMX1A-202ENST00000342310 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
LMX1A-202ENST00000342310 A4D1N5 150 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
LMX1A-202ENST00000342310 B5MCH6 92 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 PPP1R17O96001 155 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 CRYBA4P53673 196 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 Q96MF0 132 aa9.34□□□□□ -0.91
LMX1A-202ENST00000342310 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 ZNRF2Q8NHG8 242 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
LMX1A-202ENST00000342310 U3KQE9 123 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 RS1O15537 224 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 SNCGO76070 127 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 FOXI1Q12951 378 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 Q6ZSV7 163 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 TEX29Q8N6K0 151 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 ERG28Q9UKR5 140 aa9.33□□□□□ -0.92
LMX1A-202ENST00000342310 TSPAN13O95857 204 aa9.32□□□□□ -0.92
LMX1A-202ENST00000342310 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
LMX1A-202ENST00000342310 A0A0J9YX75 114 aa9.32□□□□□ -0.92
LMX1A-202ENST00000342310 TCL1BO95988 128 aa9.32□□□□□ -0.92
LMX1A-202ENST00000342310 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
LMX1A-202ENST00000342310 DCANP1Q8TF63 244 aa9.32□□□□□ -0.92
LMX1A-202ENST00000342310 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 NSUN5P1Q3KNT7 163 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 MUSTN1Q8IVN3 82 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 CITED1Q99966 193 aa9.31□□□□□ -0.92
LMX1A-202ENST00000342310 TIMM21Q9BVV7 248 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms