RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 REG3AQ06141 175 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 COA6Q5JTJ3 125 aaKnown RBP11.57□□□□□ -0.56
COL11A2-201ENST00000341947 NFE4Q86UQ8 179 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 TEN1Q86WV5 123 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 Q6YL49 198 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 Q6ZUT4 128 aa11.57□□□□□ -0.56
COL11A2-201ENST00000341947 PDE6GP18545 87 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 CCDC140Q96MF4 163 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 SMIM9A6NGZ8 99 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 CRYGDP07320 174 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 LINC00269Q8N2A0 174 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 NUPR1O60356 82 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 ZFAND2AQ8N6M9 145 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 FAM236AA0A1B0GUQ0 79 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 FAM236BA0A1B0GV22 79 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 ODF3BA8MYP8 253 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
COL11A2-201ENST00000341947 B5MCH6 92 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 HIGD2AQ9BW72 106 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 DOCK9Q9BZ29 2069 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 ANAPC1Q9H1A4 1944 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 Q6ZTI0 123 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 FAM222AQ5U5X8 452 aa11.55□□□□□ -0.56
COL11A2-201ENST00000341947 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
COL11A2-201ENST00000341947 TTTY13Q9BZ97 58 aa11.54□□□□□ -0.56
COL11A2-201ENST00000341947 RIF1Q5UIP0 2472 aaKnown RBP11.54□□□□□ -0.56
COL11A2-201ENST00000341947 LMO4P61968 165 aa11.54□□□□□ -0.56
COL11A2-201ENST00000341947 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
COL11A2-201ENST00000341947 DEFB131BA0A096LNP1 70 aa11.54□□□□□ -0.56
COL11A2-201ENST00000341947 H3BT86 120 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 LRCOL1A6NCL2 159 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 ODF1Q14990 250 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 PLA2G5P39877 138 aa11.53□□□□□ -0.56
COL11A2-201ENST00000341947 NDUFC2O95298 119 aa11.52□□□□□ -0.56
COL11A2-201ENST00000341947 MIAQ16674 131 aa11.52□□□□□ -0.56
COL11A2-201ENST00000341947 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 P0DMU3 169 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 FAM231AP0DMU4 169 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 FAM231CP0DMU5 169 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 CDPF1Q6NVV7 123 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 FAM19A1Q7Z5A9 133 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 GPR179Q6PRD1 2367 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 SHISA2Q6UWI4 295 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 CHCHD10Q8WYQ3 142 aaPredicted RBP11.52□□□□□ -0.57
COL11A2-201ENST00000341947 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
COL11A2-201ENST00000341947 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
COL11A2-201ENST00000341947 A0A087WZ39 114 aa11.51□□□□□ -0.57
COL11A2-201ENST00000341947 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
COL11A2-201ENST00000341947 H7C423 109 aa11.51□□□□□ -0.57
COL11A2-201ENST00000341947 CRYGBP07316 175 aa11.51□□□□□ -0.57
COL11A2-201ENST00000341947 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
COL11A2-201ENST00000341947 LYPD6Q86Y78 171 aa11.5□□□□□ -0.57
COL11A2-201ENST00000341947 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
COL11A2-201ENST00000341947 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
COL11A2-201ENST00000341947 IGF1P05019 195 aa11.5□□□□□ -0.57
COL11A2-201ENST00000341947 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
COL11A2-201ENST00000341947 CASC2Q6XLA1 102 aa11.49□□□□□ -0.57
COL11A2-201ENST00000341947 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
COL11A2-201ENST00000341947 WFDC2Q14508 124 aa11.49□□□□□ -0.57
COL11A2-201ENST00000341947 WISP2O76076 250 aa11.49□□□□□ -0.57
COL11A2-201ENST00000341947 BPY2O14599 106 aa11.48□□□□□ -0.57
COL11A2-201ENST00000341947 FOXI1Q12951 378 aa11.48□□□□□ -0.57
COL11A2-201ENST00000341947 K7EQG2 157 aa11.47□□□□□ -0.57
COL11A2-201ENST00000341947 TDRG1Q3Y452 100 aa11.47□□□□□ -0.57
COL11A2-201ENST00000341947 ZNF80P51504 273 aaPredicted RBP11.47□□□□□ -0.57
COL11A2-201ENST00000341947 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
COL11A2-201ENST00000341947 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
COL11A2-201ENST00000341947 MIFP14174 115 aa11.46□□□□□ -0.57
COL11A2-201ENST00000341947 HIST2H2BDQ6DRA6 164 aa11.46□□□□□ -0.57
COL11A2-201ENST00000341947 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.57
COL11A2-201ENST00000341947 A0A096LNI7 61 aa11.46□□□□□ -0.57
COL11A2-201ENST00000341947 A0A0J9YXY3 114 aa11.46□□□□□ -0.58
COL11A2-201ENST00000341947 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.58
COL11A2-201ENST00000341947 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
COL11A2-201ENST00000341947 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
COL11A2-201ENST00000341947 LINC00574Q9H8X3 128 aa11.45□□□□□ -0.58
COL11A2-201ENST00000341947 J3KT08 172 aa11.44□□□□□ -0.58
COL11A2-201ENST00000341947 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
COL11A2-201ENST00000341947 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
COL11A2-201ENST00000341947 LINC00482Q8N8I6 264 aa11.43□□□□□ -0.58
COL11A2-201ENST00000341947 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
COL11A2-201ENST00000341947 Q6ZSV7 163 aa11.43□□□□□ -0.58
COL11A2-201ENST00000341947 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
COL11A2-201ENST00000341947 C20orf173Q96LM9 149 aa11.43□□□□□ -0.58
COL11A2-201ENST00000341947 TRAV10A0A0B4J240 114 aa11.42□□□□□ -0.58
COL11A2-201ENST00000341947 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
COL11A2-201ENST00000341947 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
COL11A2-201ENST00000341947 ZGRF1Q86YA3 2104 aa11.42□□□□□ -0.58
COL11A2-201ENST00000341947 FRMD6-AS1P0C7T7 363 aa11.41□□□□□ -0.58
COL11A2-201ENST00000341947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.41□□□□□ -0.58
COL11A2-201ENST00000341947 USP17L23D6RBM5 183 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms