RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
BRCC3-202ENST00000340647 Q6ZSA8 131 aa11.19□□□□□ -0.62
BRCC3-202ENST00000340647 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
BRCC3-202ENST00000340647 M0QY20 66 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 PDE6DO43924 150 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 GNG4P50150 75 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 MED9Q9NWA0 146 aa11.18□□□□□ -0.62
BRCC3-202ENST00000340647 K7EN84 100 aa11.17□□□□□ -0.62
BRCC3-202ENST00000340647 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
BRCC3-202ENST00000340647 TOR2AQ5JU69 321 aa11.17□□□□□ -0.62
BRCC3-202ENST00000340647 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
BRCC3-202ENST00000340647 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
BRCC3-202ENST00000340647 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-202ENST00000340647 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-202ENST00000340647 IGKV2D-24A0A075B6R9 120 aa11.16□□□□□ -0.62
BRCC3-202ENST00000340647 F5H697 171 aa11.16□□□□□ -0.62
BRCC3-202ENST00000340647 Q8N976 141 aa11.16□□□□□ -0.62
BRCC3-202ENST00000340647 AP1S3Q96PC3 154 aa11.16□□□□□ -0.62
BRCC3-202ENST00000340647 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
BRCC3-202ENST00000340647 A0A087WX48 190 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 TEX46H3BTG2 121 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 SUMO4Q6EEV6 95 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 LYPD6BQ8NI32 183 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
BRCC3-202ENST00000340647 hCG_2014768A0A024R1R8 64 aa11.14□□□□□ -0.63
BRCC3-202ENST00000340647 P01737 135 aa11.14□□□□□ -0.63
BRCC3-202ENST00000340647 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
BRCC3-202ENST00000340647 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
BRCC3-202ENST00000340647 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 IFNA1P01562 189 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 NTF3P20783 257 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 CTRLP40313 264 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 C15orf54Q8N8G6 183 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 CNFNQ9BYD5 112 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
BRCC3-202ENST00000340647 COX11Q9Y6N1 276 aa11.13□□□□□ -0.63
BRCC3-202ENST00000340647 CACNG7P62955 275 aa11.12□□□□□ -0.63
BRCC3-202ENST00000340647 GTSF1Q8WW33 167 aa11.12□□□□□ -0.63
BRCC3-202ENST00000340647 FRZBQ92765 325 aa11.12□□□□□ -0.63
BRCC3-202ENST00000340647 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
BRCC3-202ENST00000340647 F2Z2F3 143 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 MGPP08493 103 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 RBX1P62877 108 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 ELOBQ15370 118 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 RMI2Q96E14 147 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 CHCHD5Q9BSY4 110 aa11.11□□□□□ -0.63
BRCC3-202ENST00000340647 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
BRCC3-202ENST00000340647 Q0VG73 95 aa11.1□□□□□ -0.63
BRCC3-202ENST00000340647 GAGE6Q13070 117 aa11.1□□□□□ -0.63
BRCC3-202ENST00000340647 WDR73Q6P4I2 378 aa11.1□□□□□ -0.63
BRCC3-202ENST00000340647 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
BRCC3-202ENST00000340647 ANGP03950 147 aaKnown RBP11.09□□□□□ -0.63
BRCC3-202ENST00000340647 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
BRCC3-202ENST00000340647 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
BRCC3-202ENST00000340647 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
BRCC3-202ENST00000340647 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
BRCC3-202ENST00000340647 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
BRCC3-202ENST00000340647 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
BRCC3-202ENST00000340647 RASL11AQ6T310 242 aa11.08□□□□□ -0.64
BRCC3-202ENST00000340647 C1orf43Q9BWL3 253 aa11.08□□□□□ -0.64
BRCC3-202ENST00000340647 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
BRCC3-202ENST00000340647 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 XKRY2A2RUG3 117 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 LINC00269Q8N2A0 174 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 BIN3Q9NQY0 253 aa11.07□□□□□ -0.64
BRCC3-202ENST00000340647 IGLV4-60A0A075B6I1 120 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 KRTAP10-4P60372 401 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-202ENST00000340647 MIAQ16674 131 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 KCNIP4Q6PIL6 250 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 NIT2Q9NQR4 276 aa11.06□□□□□ -0.64
BRCC3-202ENST00000340647 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 IGHV1-24A0A0C4DH33 117 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 H7C1H1 209 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 PRSS1P07477 247 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 BLOC1S1P78537 153 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 PGLYRP4Q96LB8 373 aa11.05□□□□□ -0.64
BRCC3-202ENST00000340647 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
BRCC3-202ENST00000340647 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
BRCC3-202ENST00000340647 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
BRCC3-202ENST00000340647 CRPP02741 224 aa11.04□□□□□ -0.64
BRCC3-202ENST00000340647 TWIST1Q15672 202 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms