RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 NFE4Q86UQ8 179 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
LIN54-201ENST00000340417 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 SIVA1O15304 175 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 K7EN84 100 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 COL5A1-AS1Q5SY13 56 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
LIN54-201ENST00000340417 FGF6P10767 208 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 NDUFA1O15239 70 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BJP06899 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BOP23527 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 ZNF479Q96JC4 524 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 MSRB1Q9NZV6 116 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
LIN54-201ENST00000340417 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
LIN54-201ENST00000340417 ESDP10768 282 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
LIN54-201ENST00000340417 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
LIN54-201ENST00000340417 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 BRI3O95415 125 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
LIN54-201ENST00000340417 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 SLC25A29Q8N8R3 303 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 TAL2Q16559 108 aa9.53□□□□□ -0.88
LIN54-201ENST00000340417 C9JQL5 133 aa9.52□□□□□ -0.88
LIN54-201ENST00000340417 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.88
LIN54-201ENST00000340417 CRIP2P52943 208 aaPredicted RBP9.52□□□□□ -0.89
LIN54-201ENST00000340417 SNHG12Q9BXW3 62 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 K7EMI3 77 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
LIN54-201ENST00000340417 SORL1Q92673 2214 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 A0A1B0GV72 72 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 UBE2AP49459 152 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 EXPH5Q8NEV8 1989 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 MYO9AB2RTY4 2548 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.51□□□□□ -0.89
LIN54-201ENST00000340417 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
LIN54-201ENST00000340417 USP9XQ93008 2570 aaPredicted RBP9.51□□□□□ -0.89
LIN54-201ENST00000340417 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ETDCA0A1B0GVM5 59 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 CCL25O15444 150 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 CTAG1AP78358 180 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
LIN54-201ENST00000340417 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 HIGD2BQ4VC39 106 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 TRAV8-2A0A0B4J237 113 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 EDN2P20800 178 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 REG3AQ06141 175 aa9.49□□□□□ -0.89
LIN54-201ENST00000340417 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 BOD1L2Q8IYS8 172 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 DCANP1Q8TF63 244 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 DOPEY1Q5JWR5 2465 aa9.48□□□□□ -0.89
LIN54-201ENST00000340417 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
LIN54-201ENST00000340417 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
LIN54-201ENST00000340417 Q8N2B8 174 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 OVOL2Q9BRP0 275 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 Q9H8V8 135 aa9.47□□□□□ -0.89
LIN54-201ENST00000340417 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
LIN54-201ENST00000340417 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.89
LIN54-201ENST00000340417 F8VRH5 84 aa9.46□□□□□ -0.89
LIN54-201ENST00000340417 COLCA2A8K830 154 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 KIR3DS1Q14943 382 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 STPG4Q8N801 248 aa9.46□□□□□ -0.9
LIN54-201ENST00000340417 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CLUHP3Q96NS8 147 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 FLNBO75369 2602 aaKnown RBP9.45□□□□□ -0.9
LIN54-201ENST00000340417 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CFAP126Q5VTH2 177 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 USP9YO00507 2555 aaPredicted RBP9.45□□□□□ -0.9
LIN54-201ENST00000340417 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 CTRLP40313 264 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 HSD52Q0P140 79 aa9.45□□□□□ -0.9
LIN54-201ENST00000340417 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms