RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 IGHG2P01859 326 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 CKS1BP61024 79 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 DAND5Q8N907 189 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 C10orf105Q8TEF2 133 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 SNCGO76070 127 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 C11orf68Q9H3H3 251 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 PRO1854Q9UHT4 67 aa8.35□□□□□ -1.07
SEMA4D-201ENST00000339861 A4D1N5 150 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 SMG1Q96Q15 3661 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 IGHV4OR15-8A0A075B7B6 117 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 A0A087WW49 117 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 TAL2Q16559 108 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 TTC32Q5I0X7 151 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 E9PLD3 99 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 M0R2P5 195 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 INSL3P51460 131 aa8.34□□□□□ -1.07
SEMA4D-201ENST00000339861 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 TMEM262E9PQX1 116 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 RNASE3P12724 160 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 OR13C6PQ8NH95 151 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 SPAG8Q99932 426 aaPredicted RBP8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 PEMTQ9UBM1 199 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 PROK1P58294 105 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
SEMA4D-201ENST00000339861 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 DOPEY1Q5JWR5 2465 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 AVPP01185 164 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 GAGE4Q13068 117 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 GAGE5Q13069 117 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
SEMA4D-201ENST00000339861 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
SEMA4D-201ENST00000339861 A6NDX4 124 aa8.31□□□□□ -1.08
SEMA4D-201ENST00000339861 TEX29Q8N6K0 151 aa8.31□□□□□ -1.08
SEMA4D-201ENST00000339861 ANAPC13Q9BS18 74 aa8.31□□□□□ -1.08
SEMA4D-201ENST00000339861 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
SEMA4D-201ENST00000339861 SLC25A20O43772 301 aa8.3□□□□□ -1.08
SEMA4D-201ENST00000339861 TSPAN13O95857 204 aa8.3□□□□□ -1.08
SEMA4D-201ENST00000339861 NSUN5P1Q3KNT7 163 aa8.3□□□□□ -1.08
SEMA4D-201ENST00000339861 UFSP1Q6NVU6 142 aa8.3□□□□□ -1.08
SEMA4D-201ENST00000339861 A8MZ25 164 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 A0A0J9YX75 114 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 PPDPFLQ8WWR9 84 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 CHCHD5Q9BSY4 110 aa8.29□□□□□ -1.08
SEMA4D-201ENST00000339861 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 CFC1P0CG37 223 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 COL27A1Q8IZC6 1860 aaPredicted RBP8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 H3BUA1 57 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 Q96MF0 132 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 IGLV2-18A0A075B6J9 118 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 INSP01308 110 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 TMEM61Q8N0U2 210 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 ATP6V0BQ99437 205 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 U3KQE9 123 aa8.28□□□□□ -1.08
SEMA4D-201ENST00000339861 TCL1BO95988 128 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 ATXN8Q156A1 80 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 NDUFA11Q86Y39 141 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 LINC01619G3V211 115 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 YAE1D1Q9NRH1 226 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
SEMA4D-201ENST00000339861 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE7O76087 117 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE12FP0CL80 117 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE12GP0CL81 117 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 GAGE12IP0CL82 117 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 FOXI1Q12951 378 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 PIFOQ8TCI5 191 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 TRBV20-1A0A075B6N2 111 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 A0A0J9YY99 117 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 HTN3P15516 51 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 LINC00158P58513 81 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 ZFAND6Q6FIF0 208 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 GPHB5Q86YW7 130 aa8.26□□□□□ -1.09
SEMA4D-201ENST00000339861 ANKRD29Q8N6D5 301 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms