RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
RIOK3-201ENST00000339486 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 TEX49A0A1B0GTD5 131 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 LINC00158P58513 81 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 C9orf153Q5TBE3 101 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 EBI3Q14213 229 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 CLEC2BQ92478 149 aa9.41□□□□□ -0.9
RIOK3-201ENST00000339486 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 UBE2E2Q96LR5 201 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 CRPP02741 224 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 CEMP1Q6PRD7 247 aaPredicted RBP9.4□□□□□ -0.9
RIOK3-201ENST00000339486 SONP18583 2426 aaKnown RBP9.4□□□□□ -0.9
RIOK3-201ENST00000339486 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
RIOK3-201ENST00000339486 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.91
RIOK3-201ENST00000339486 LINC01619G3V211 115 aa9.4□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV3-30P01768 117 aa9.4□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.91
RIOK3-201ENST00000339486 RPL36AP83881 106 aaKnown RBP9.4□□□□□ -0.91
RIOK3-201ENST00000339486 RPL36ALQ969Q0 106 aaKnown RBP9.4□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV3-33P01772 117 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 Q8N6K4 173 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
RIOK3-201ENST00000339486 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 UBE2D1P51668 147 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
RIOK3-201ENST00000339486 HIVEP3Q5T1R4 2406 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 STHQ8IWL8 128 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 ZNRF2Q8NHG8 242 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 Q9H8V8 135 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 A0A0J9YXY3 114 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
RIOK3-201ENST00000339486 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 PEMTQ9UBM1 199 aa9.38□□□□□ -0.91
RIOK3-201ENST00000339486 PAX4O43316 350 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 A0A1W2PRX2 142 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 ZNF22P17026 224 aaPredicted RBP9.37□□□□□ -0.91
RIOK3-201ENST00000339486 ADORA2A-AS1P86434 159 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 B4DSR2 109 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 RS1O15537 224 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 MSMBP08118 114 aa9.37□□□□□ -0.91
RIOK3-201ENST00000339486 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 REV3LO60673 3130 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 NOTCH2Q04721 2471 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 NAV2Q8IVL1 2488 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 A0A0B4J2C4 111 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 H3BUA1 57 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 P0DMU3 169 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 FAM231AP0DMU4 169 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 FAM231CP0DMU5 169 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
RIOK3-201ENST00000339486 CHCHD5Q9BSY4 110 aa9.36□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV4-61A0A0C4DH41 118 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
RIOK3-201ENST00000339486 FREM2Q5SZK8 3169 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 EYSQ5T1H1 3165 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
RIOK3-201ENST00000339486 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
RIOK3-201ENST00000339486 TRIAP1O43715 76 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
RIOK3-201ENST00000339486 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
RIOK3-201ENST00000339486 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 USP34Q70CQ2 3546 aa9.35□□□□□ -0.91
RIOK3-201ENST00000339486 GNLYP22749 145 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 MAPK1IP1LQ8NDC0 245 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 FAM236AA0A1B0GUQ0 79 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 FAM236BA0A1B0GV22 79 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 H3BT86 120 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 INSP01308 110 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 BAALC-AS2P0C853 105 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-201ENST00000339486 UBE2D3P61077 147 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
RIOK3-201ENST00000339486 UBE2D2P62837 147 aa9.34□□□□□ -0.91
RIOK3-201ENST00000339486 IGIPA6NJ69 53 aa9.34□□□□□ -0.92
RIOK3-201ENST00000339486 LGALS9O00182 355 aa9.34□□□□□ -0.92
RIOK3-201ENST00000339486 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.92
RIOK3-201ENST00000339486 LMO4P61968 165 aa9.34□□□□□ -0.92
RIOK3-201ENST00000339486 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 IGHV4OR15-8A0A075B7B6 117 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 A0A087WW49 117 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 MGAQ8IWI9 3026 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 IGHG2P01859 326 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
RIOK3-201ENST00000339486 M0QY20 66 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms