RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 IGHV3-53P01767 116 aa10.65□□□□□ -0.7
PCDH8-201ENST00000338862 TSPEAR-AS2P59090 65 aa10.65□□□□□ -0.7
PCDH8-201ENST00000338862 Q8N6K4 173 aa10.65□□□□□ -0.7
PCDH8-201ENST00000338862 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.71
PCDH8-201ENST00000338862 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.71
PCDH8-201ENST00000338862 A0A0J9YY99 117 aa10.65□□□□□ -0.71
PCDH8-201ENST00000338862 PROK1P58294 105 aa10.65□□□□□ -0.71
PCDH8-201ENST00000338862 Q8N1Y9 231 aa10.65□□□□□ -0.71
PCDH8-201ENST00000338862 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 CFC1P0CG37 223 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 COX6CP09669 75 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
PCDH8-201ENST00000338862 ITLN2Q8WWU7 325 aaPredicted RBP10.64□□□□□ -0.71
PCDH8-201ENST00000338862 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 C10orf126Q8N4M7 172 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
PCDH8-201ENST00000338862 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
PCDH8-201ENST00000338862 NDUFA4O00483 81 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 GNLYP22749 145 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 Q6ZUT4 128 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 TEN1Q86WV5 123 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 MEIG1Q5JSS6 88 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 Q6ZSV7 163 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 CCL19Q99731 98 aa10.63□□□□□ -0.71
PCDH8-201ENST00000338862 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
PCDH8-201ENST00000338862 PIMREGQ9BSJ6 248 aa10.62□□□□□ -0.71
PCDH8-201ENST00000338862 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
PCDH8-201ENST00000338862 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
PCDH8-201ENST00000338862 ACANP16112 2415 aa10.62□□□□□ -0.71
PCDH8-201ENST00000338862 TRAV8-4A0A0B4J246 113 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 LMO4P61968 165 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 LINC01587Q99440 93 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
PCDH8-201ENST00000338862 DEFB131AP59861 70 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 CLEC2BQ92478 149 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
PCDH8-201ENST00000338862 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
PCDH8-201ENST00000338862 HRNRQ86YZ3 2850 aaPredicted RBP10.6□□□□□ -0.71
PCDH8-201ENST00000338862 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
PCDH8-201ENST00000338862 M0R2P5 195 aa10.6□□□□□ -0.71
PCDH8-201ENST00000338862 RS1O15537 224 aa10.6□□□□□ -0.71
PCDH8-201ENST00000338862 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
PCDH8-201ENST00000338862 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 C19orf84I3L1E1 186 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 GATA3P23771 443 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 EBI3Q14213 229 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 MUC4Q99102 2169 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 CRYGDP07320 174 aa10.59□□□□□ -0.71
PCDH8-201ENST00000338862 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 DYNLRB2Q8TF09 96 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
PCDH8-201ENST00000338862 TSHBP01222 138 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 COX8CQ7Z4L0 72 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
PCDH8-201ENST00000338862 CRYBG3Q68DQ2 2970 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 ATXN8Q156A1 80 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 TMEM262E9PQX1 116 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
PCDH8-201ENST00000338862 IGLV4-69A0A075B6H9 119 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 I3L3M4 83 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 C11orf71Q6IPW1 123 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 PSMG3-AS1Q96PY0 264 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 PRO0461Q9UI25 63 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
PCDH8-201ENST00000338862 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
PCDH8-201ENST00000338862 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
PCDH8-201ENST00000338862 CFHR3Q02985 330 aa10.55□□□□□ -0.72
PCDH8-201ENST00000338862 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
PCDH8-201ENST00000338862 CDIP1Q9H305 208 aa10.55□□□□□ -0.72
PCDH8-201ENST00000338862 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
PCDH8-201ENST00000338862 IGHV3-30-3P0DP02 117 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 SCGB1A1P11684 91 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 RHODO00212 210 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
PCDH8-201ENST00000338862 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 H3BMM0 161 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 UBE2WQ96B02 151 aa10.54□□□□□ -0.72
PCDH8-201ENST00000338862 FLNCQ14315 2725 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms