RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TPPP3Q9BW30 176 aa8.73□□□□□ -1.01
NUDCD3-201ENST00000338427 GAGE6Q13070 117 aa8.72□□□□□ -1.01
NUDCD3-201ENST00000338427 CENPWQ5EE01 88 aa8.72□□□□□ -1.01
NUDCD3-201ENST00000338427 RMI2Q96E14 147 aa8.72□□□□□ -1.01
NUDCD3-201ENST00000338427 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
NUDCD3-201ENST00000338427 COX11Q9Y6N1 276 aa8.72□□□□□ -1.01
NUDCD3-201ENST00000338427 ANGP03950 147 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 EIF5AP63241 154 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 ELOBQ15370 118 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 KCNIP4Q6PIL6 250 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 CLPSL2Q6UWE3 100 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 SCXQ7RTU7 201 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
NUDCD3-201ENST00000338427 TRAV1-1A0A0B4J248 108 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 MGPP08493 103 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 IGLC6P0CF74 106 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 DAZAP1Q96EP5 407 aaKnown RBP8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
NUDCD3-201ENST00000338427 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 M0QY20 66 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 SMIM17P0DL12 118 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 SULT1A2P50226 295 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 RBX1P62877 108 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 Q0VG73 95 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 MED9Q9NWA0 146 aa8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
NUDCD3-201ENST00000338427 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 LYZL1Q6UWQ5 148 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 CIRBP-AS1Q8TBR5 109 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 VAX2Q9UIW0 290 aa8.68□□□□□ -1.02
NUDCD3-201ENST00000338427 PRSS1P07477 247 aa8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 GNG4P50150 75 aa8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 NKX2-5P52952 324 aaPredicted RBP8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 NUDT10Q8NFP7 164 aa8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 NUDT11Q96G61 164 aa8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
NUDCD3-201ENST00000338427 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 CRPP02741 224 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 NTF3P20783 257 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 RAB5CP51148 216 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 GFRA4Q9GZZ7 299 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 PKHD1L1Q86WI1 4243 aa8.66□□□□□ -1.02
NUDCD3-201ENST00000338427 IFNA1P01562 189 aa8.65□□□□□ -1.02
NUDCD3-201ENST00000338427 P01737 135 aa8.65□□□□□ -1.02
NUDCD3-201ENST00000338427 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
NUDCD3-201ENST00000338427 RPS20P60866 119 aaKnown RBP8.65□□□□□ -1.02
NUDCD3-201ENST00000338427 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
NUDCD3-201ENST00000338427 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 TRBV25-1A0A075B6N4 114 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 PANO1I0J062 215 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 J3QL48 77 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 BCL2P10415 239 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 CACNG7P62955 275 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 TCTE3Q8IZS6 198 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 C20orf203Q8NBC4 194 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 RNASE7Q9H1E1 156 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
NUDCD3-201ENST00000338427 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 TEX46H3BTG2 121 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 K7EN84 100 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 MIAQ16674 131 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 EIF5AL1Q6IS14 154 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
NUDCD3-201ENST00000338427 F2Z2F3 143 aa8.62□□□□□ -1.03
NUDCD3-201ENST00000338427 PDE6DO43924 150 aa8.62□□□□□ -1.03
NUDCD3-201ENST00000338427 SLC51BQ86UW2 128 aa8.62□□□□□ -1.03
NUDCD3-201ENST00000338427 C9orf62Q8N4C0 152 aa8.62□□□□□ -1.03
NUDCD3-201ENST00000338427 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 REG3AQ06141 175 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 TWIST1Q15672 202 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 Q6ZNX1 250 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 GATD1Q8NB37 220 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 DPH3P1Q9H4G8 78 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-201ENST00000338427 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
NUDCD3-201ENST00000338427 H7C1H1 209 aa8.6□□□□□ -1.03
NUDCD3-201ENST00000338427 SLPIP03973 132 aa8.6□□□□□ -1.03
NUDCD3-201ENST00000338427 C9orf163Q8N9P6 203 aa8.6□□□□□ -1.03
NUDCD3-201ENST00000338427 GTSF1Q8WW33 167 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms