RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 ESRGQ1W209 222 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 FAM104BQ5XKR9 115 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
APOBEC3B-202ENST00000335760 TRBV7-3A0A075B6L6 115 aa9.74□□□□□ -0.85
APOBEC3B-202ENST00000335760 CCL18P55774 89 aa9.74□□□□□ -0.85
APOBEC3B-202ENST00000335760 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
APOBEC3B-202ENST00000335760 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
APOBEC3B-202ENST00000335760 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
APOBEC3B-202ENST00000335760 LYSTQ99698 3801 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 ALMS1Q8TCU4 4167 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 LY6G6CO95867 125 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 UBE2D3P61077 147 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 UBE2D2P62837 147 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 MRPL51Q4U2R6 128 aaKnown RBP9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 LGALS9CQ6DKI2 356 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 FRZBQ92765 325 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 RPL39LQ96EH5 51 aaKnown RBP9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 MRAP2Q96G30 205 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 DNAJC30Q96LL9 226 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
APOBEC3B-202ENST00000335760 SMKR1H3BMG3 65 aa9.72□□□□□ -0.85
APOBEC3B-202ENST00000335760 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
APOBEC3B-202ENST00000335760 NCR2O95944 276 aa9.72□□□□□ -0.85
APOBEC3B-202ENST00000335760 LINC00588Q9Y4M8 146 aa9.72□□□□□ -0.85
APOBEC3B-202ENST00000335760 TGIF2-C20orf24A0A0A6YYL0 155 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 ELOBQ15370 118 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 TMEM136Q6ZRR5 245 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 GTSF1LQ9H1H1 148 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.86
APOBEC3B-202ENST00000335760 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 CKS2P33552 79 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 CBLN2Q8IUK8 224 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 SMCO4Q9NRQ5 59 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
APOBEC3B-202ENST00000335760 LCE6AA0A183 80 aa9.69□□□□□ -0.86
APOBEC3B-202ENST00000335760 RPS10P46783 165 aaKnown RBP9.69□□□□□ -0.86
APOBEC3B-202ENST00000335760 TIRAPP58753 221 aa9.69□□□□□ -0.86
APOBEC3B-202ENST00000335760 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3B-202ENST00000335760 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
APOBEC3B-202ENST00000335760 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 D6R8Y8 96 aa9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 COX19Q49B96 90 aa9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 ST20Q9HBF5 79 aa9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
APOBEC3B-202ENST00000335760 TRBV24-1A0A075B6N3 115 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 TRBV6-5A0A0K0K1A5 114 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 PPP1R17O96001 155 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 NRACQ8N912 160 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 YPEL4Q96NS1 127 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 HYDINQ4G0P3 5121 aa9.67□□□□□ -0.86
APOBEC3B-202ENST00000335760 ATP6V1G1O75348 118 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 HLA-DQA1P01909 254 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 APCSP02743 223 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 PPBPP02775 128 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 LELP1Q5T871 98 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 ORMDL3Q8N138 153 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
APOBEC3B-202ENST00000335760 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
APOBEC3B-202ENST00000335760 SDHAF1A6NFY7 115 aa9.65□□□□□ -0.86
APOBEC3B-202ENST00000335760 PRELID3AQ96N28 172 aa9.65□□□□□ -0.86
APOBEC3B-202ENST00000335760 SCO1O75880 301 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 MT-ND6P03923 174 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 PMCHP20382 165 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 S100A1P23297 94 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 WFDC10BQ8IUB3 73 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 DEFB104AQ8WTQ1 72 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 MRPL18Q9H0U6 180 aaKnown RBP9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 Q9H8V8 135 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 RYR2Q92736 4967 aa9.64□□□□□ -0.87
APOBEC3B-202ENST00000335760 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 NPYP01303 97 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 FABP9Q0Z7S8 132 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 COTL1Q14019 142 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 C20orf78Q9BR46 151 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 TRAPPC1Q9Y5R8 145 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 IGLV2-18A0A075B6J9 118 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 I3L3M4 83 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 PHOX2AO14813 284 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 SIVA1O15304 175 aa9.63□□□□□ -0.87
APOBEC3B-202ENST00000335760 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
APOBEC3B-202ENST00000335760 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
APOBEC3B-202ENST00000335760 VCYO14598 125 aa9.62□□□□□ -0.87
APOBEC3B-202ENST00000335760 LAMTOR2Q9Y2Q5 125 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms