RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ELANEP08246 267 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 PRB1P04280 392 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 P0DMU3 169 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 FAM231AP0DMU4 169 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 FAM231CP0DMU5 169 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 C16orf92Q96LL3 132 aa13.69□□□□□ -0.22
PKP3-201ENST00000331563 TSHBP01222 138 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 OR13C6PQ8NH95 151 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 TRGV11A0A075B6L2 103 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 TRBV10-2A0A0K0K1G8 114 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 ABCA12Q86UK0 2595 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 MUSTN1Q8IVN3 82 aa13.68□□□□□ -0.22
PKP3-201ENST00000331563 TMEM263Q8WUH6 116 aaKnown RBP13.68□□□□□ -0.22
PKP3-201ENST00000331563 ECSCRQ19T08 205 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 CLEC19AQ6UXS0 136 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 FAM240AA0A1B0GVK7 77 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 UQCRQO14949 82 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 C9orf47Q6ZRZ4 202 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 ZNRF2Q8NHG8 242 aa13.67□□□□□ -0.22
PKP3-201ENST00000331563 CITED2Q99967 270 aaPredicted RBP13.67□□□□□ -0.22
PKP3-201ENST00000331563 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
PKP3-201ENST00000331563 ZFP36P26651 326 aaKnown RBP13.66□□□□□ -0.22
PKP3-201ENST00000331563 PPP1R17O96001 155 aa13.66□□□□□ -0.22
PKP3-201ENST00000331563 EBI3Q14213 229 aa13.66□□□□□ -0.22
PKP3-201ENST00000331563 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
PKP3-201ENST00000331563 KLK5Q9Y337 293 aaPredicted RBP13.66□□□□□ -0.22
PKP3-201ENST00000331563 ZFAND3Q9H8U3 227 aa13.65□□□□□ -0.22
PKP3-201ENST00000331563 EDA2RQ9HAV5 297 aa13.65□□□□□ -0.22
PKP3-201ENST00000331563 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.22
PKP3-201ENST00000331563 F5H697 171 aa13.65□□□□□ -0.22
PKP3-201ENST00000331563 EIF4EBP3O60516 100 aaPredicted RBP13.65□□□□□ -0.22
PKP3-201ENST00000331563 METTL26Q96S19 204 aa13.65□□□□□ -0.22
PKP3-201ENST00000331563 IGHV1-69DA0A0B4J2H0 117 aa13.64□□□□□ -0.23
PKP3-201ENST00000331563 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
PKP3-201ENST00000331563 LINC00526Q96FQ7 95 aa13.64□□□□□ -0.23
PKP3-201ENST00000331563 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
PKP3-201ENST00000331563 FBN2P35556 2912 aa13.64□□□□□ -0.23
PKP3-201ENST00000331563 RPS28P62857 69 aaKnown RBP13.64□□□□□ -0.23
PKP3-201ENST00000331563 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 CHD6Q8TD26 2715 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 A0A0B4J2C4 111 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 PRSS2P07478 247 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
PKP3-201ENST00000331563 TMEM219Q86XT9 240 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 IMUPQ9GZP8 106 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
PKP3-201ENST00000331563 GNRH2O43555 120 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 AMELXQ99217 191 aa13.63□□□□□ -0.23
PKP3-201ENST00000331563 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
PKP3-201ENST00000331563 TMEM141Q96I45 108 aa13.62□□□□□ -0.23
PKP3-201ENST00000331563 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
PKP3-201ENST00000331563 TRIAP1O43715 76 aa13.62□□□□□ -0.23
PKP3-201ENST00000331563 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
PKP3-201ENST00000331563 ABCA2Q9BZC7 2435 aa13.62□□□□□ -0.23
PKP3-201ENST00000331563 DEFB1P60022 68 aa13.61□□□□□ -0.23
PKP3-201ENST00000331563 MRPL53Q96EL3 112 aaKnown RBP13.61□□□□□ -0.23
PKP3-201ENST00000331563 BPESC1Q9GZL8 116 aa13.61□□□□□ -0.23
PKP3-201ENST00000331563 LY6G5BQ8NDX9 201 aa13.61□□□□□ -0.23
PKP3-201ENST00000331563 IGHV7-81A0A0B4J1V7 117 aa13.6□□□□□ -0.23
PKP3-201ENST00000331563 ZNF876PQ49A33 203 aa13.6□□□□□ -0.23
PKP3-201ENST00000331563 OPRPNQ99935 248 aaPredicted RBP13.6□□□□□ -0.23
PKP3-201ENST00000331563 SPANXDQ9BXN6 97 aa13.6□□□□□ -0.23
PKP3-201ENST00000331563 ZNF256Q9Y2P7 627 aaPredicted RBP13.6□□□□□ -0.23
PKP3-201ENST00000331563 VCYO14598 125 aa13.59□□□□□ -0.23
PKP3-201ENST00000331563 SPANXCQ9NY87 97 aa13.59□□□□□ -0.23
PKP3-201ENST00000331563 A0A087WWL8 130 aa13.59□□□□□ -0.23
PKP3-201ENST00000331563 VMO1Q7Z5L0 202 aa13.59□□□□□ -0.23
PKP3-201ENST00000331563 BBC3Q96PG8 261 aaPredicted RBP13.59□□□□□ -0.23
PKP3-201ENST00000331563 TIMM17AQ99595 171 aa13.59□□□□□ -0.23
PKP3-201ENST00000331563 NBPF19A0A087WUL8 3843 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 LEPROTO15243 131 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 C20orf173Q96LM9 149 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 SDHAF1A6NFY7 115 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 ZNF22P17026 224 aaPredicted RBP13.58□□□□□ -0.24
PKP3-201ENST00000331563 ZFAND2AQ8N6M9 145 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 JPT2Q9H910 190 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.24
PKP3-201ENST00000331563 ANKRD17O75179 2603 aaKnown RBP13.57□□□□□ -0.24
PKP3-201ENST00000331563 H7C423 109 aa13.57□□□□□ -0.24
PKP3-201ENST00000331563 COX6CP09669 75 aa13.57□□□□□ -0.24
PKP3-201ENST00000331563 RPL11P62913 178 aaKnown RBP13.57□□□□□ -0.24
PKP3-201ENST00000331563 F5H768 121 aa13.57□□□□□ -0.24
PKP3-201ENST00000331563 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 H3BT86 120 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 GAGE2AQ6NT46 116 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 DEFB121Q5J5C9 76 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 FAM74A4Q5TZK3 123 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 CCDC140Q96MF4 163 aa13.56□□□□□ -0.24
PKP3-201ENST00000331563 UBR5O95071 2799 aaPredicted RBP13.55□□□□□ -0.24
PKP3-201ENST00000331563 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
PKP3-201ENST00000331563 LENEPQ9Y5L5 61 aa13.55□□□□□ -0.24
PKP3-201ENST00000331563 TMEM223A0PJW6 202 aa13.55□□□□□ -0.24
PKP3-201ENST00000331563 NPC2P61916 151 aa13.55□□□□□ -0.24
PKP3-201ENST00000331563 CLEC2BQ92478 149 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms