RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 ITLN2Q8WWU7 325 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 SCGB3A1Q96QR1 104 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 IGKV3-7A0A075B6H7 116 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 LMO4P61968 165 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 CEMP1Q6PRD7 247 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 ZFAND2AQ8N6M9 145 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 KIR2DL5BQ8NHK3 375 aa13.61□□□□□ -0.23
TRAPPC12-201ENST00000324266 TRAV41A0A0B4J266 112 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 SPANXCQ9NY87 97 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 F6UB75 175 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 IGHV3-30P01768 117 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 IGHV3-30-5P0DP03 117 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 SUMO2P61956 95 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 ATXN8Q156A1 80 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
TRAPPC12-201ENST00000324266 A0A0J9YY99 117 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 TRBV10-2A0A0K0K1G8 114 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 MGPP08493 103 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 P0DMU3 169 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 FAM231AP0DMU4 169 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 FAM231CP0DMU5 169 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 C9orf139Q6ZV77 190 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 ZNRF2Q8NHG8 242 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 CHD6Q8TD26 2715 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 MRAPQ8TCY5 172 aa13.59□□□□□ -0.23
TRAPPC12-201ENST00000324266 USP9XQ93008 2570 aaPredicted RBP13.58□□□□□ -0.23
TRAPPC12-201ENST00000324266 IMUPQ9GZP8 106 aa13.58□□□□□ -0.23
TRAPPC12-201ENST00000324266 MAP1AP78559 2803 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-201ENST00000324266 GNRH2O43555 120 aa13.58□□□□□ -0.24
TRAPPC12-201ENST00000324266 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-201ENST00000324266 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
TRAPPC12-201ENST00000324266 PHLDA3Q9Y5J5 127 aa13.58□□□□□ -0.24
TRAPPC12-201ENST00000324266 ABCA2Q9BZC7 2435 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 RNASE4P34096 147 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 IGHV3-11P01762 117 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 ORMDL2Q53FV1 153 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 NEXN-AS1Q8NBZ9 246 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 DPH3P1Q9H4G8 78 aa13.57□□□□□ -0.24
TRAPPC12-201ENST00000324266 TRAV21A0A0B4J279 112 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 GAGE2AQ6NT46 116 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 C2orf66Q6UXQ4 117 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 SPANXDQ9BXN6 97 aa13.56□□□□□ -0.24
TRAPPC12-201ENST00000324266 ELANEP08246 267 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 MOB4Q9Y3A3 225 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 LENEPQ9Y5L5 61 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 MUC4Q99102 2169 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 IGHV4-39P01824 125 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 C19orf54Q5BKX5 351 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 Q6ZS46 218 aa13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-201ENST00000324266 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
TRAPPC12-201ENST00000324266 SOCS3O14543 225 aa13.54□□□□□ -0.24
TRAPPC12-201ENST00000324266 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
TRAPPC12-201ENST00000324266 LY6EQ16553 131 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 C4orf26Q17RF5 130 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 C2orf82Q6UX34 121 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 H7C2G1 150 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 HERVK_113P61574 105 aa13.53□□□□□ -0.24
TRAPPC12-201ENST00000324266 KMT2BQ9UMN6 2715 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 C19orf84I3L1E1 186 aa13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 OVOL1O14753 267 aa13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 COX7CP15954 63 aa13.52□□□□□ -0.24
TRAPPC12-201ENST00000324266 ATP5G1P05496 136 aa13.52□□□□□ -0.25
TRAPPC12-201ENST00000324266 CRYGAP11844 174 aa13.52□□□□□ -0.25
TRAPPC12-201ENST00000324266 SLC25A29Q8N8R3 303 aa13.52□□□□□ -0.25
TRAPPC12-201ENST00000324266 TMEM263Q8WUH6 116 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-201ENST00000324266 F8WDY8 70 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 TMEM170BQ5T4T1 132 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 HRCT1Q6UXD1 115 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 DOPEY1Q5JWR5 2465 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 NDUFA4O00483 81 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 JPT2Q9H910 190 aa13.51□□□□□ -0.25
TRAPPC12-201ENST00000324266 DEFB121Q5J5C9 76 aa13.5□□□□□ -0.25
TRAPPC12-201ENST00000324266 EDN2P20800 178 aa13.5□□□□□ -0.25
TRAPPC12-201ENST00000324266 UBR5O95071 2799 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-201ENST00000324266 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
TRAPPC12-201ENST00000324266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.257e-7■■■□□ 19
TRAPPC12-201ENST00000324266 Q1RN00 199 aa13.49□□□□□ -0.25
TRAPPC12-201ENST00000324266 DPH3Q96FX2 82 aa13.49□□□□□ -0.25
TRAPPC12-201ENST00000324266 LRRK2Q5S007 2527 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 SPG11Q96JI7 2443 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 A0A0B4J2C4 111 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 IGHV1-69DA0A0B4J2H0 117 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 H3BT86 120 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 H7C423 109 aa13.48□□□□□ -0.25
TRAPPC12-201ENST00000324266 IGHV1-69P01742 117 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms