RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 NTM-AS1Q6ZSK4 140 aa8.04□□□□□ -1.12
TPM3-204ENST00000323144 C11orf52Q96A22 123 aa8.04□□□□□ -1.12
TPM3-204ENST00000323144 AP1S3Q96PC3 154 aa8.04□□□□□ -1.12
TPM3-204ENST00000323144 C1orf43Q9BWL3 253 aa8.04□□□□□ -1.12
TPM3-204ENST00000323144 J3QL48 77 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
TPM3-204ENST00000323144 MGPP08493 103 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 H2AFB1P0C5Y9 115 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 CCL20P78556 96 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 KCNIP4Q6PIL6 250 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 CHCHD5Q9BSY4 110 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 SSBP4Q9BWG4 385 aaPredicted RBP8.03□□□□□ -1.12
TPM3-204ENST00000323144 GNG13Q9P2W3 67 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 KIF25-AS1Q9Y6Z4 181 aa8.03□□□□□ -1.12
TPM3-204ENST00000323144 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.12
TPM3-204ENST00000323144 HMSDA8MTL9 139 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 S100A9P06702 114 aaKnown RBP8.02□□□□□ -1.13
TPM3-204ENST00000323144 ELOBQ15370 118 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 CHAC1Q9BUX1 264 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
TPM3-204ENST00000323144 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 F5H697 171 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 IGLV2-8P01709 118 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 Q0VG73 95 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 GAGE6Q13070 117 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 SUMO4Q6EEV6 95 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 MANBALQ9NQG1 85 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 VAX2Q9UIW0 290 aa8.01□□□□□ -1.13
TPM3-204ENST00000323144 TRBV20OR9-2A0A075B6H5 130 aa8□□□□□ -1.13
TPM3-204ENST00000323144 A0A0D9SG52 128 aa8□□□□□ -1.13
TPM3-204ENST00000323144 RBX1P62877 108 aa8□□□□□ -1.13
TPM3-204ENST00000323144 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
TPM3-204ENST00000323144 TMUB2Q71RG4 321 aa8□□□□□ -1.13
TPM3-204ENST00000323144 RAB19A4D1S5 217 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
TPM3-204ENST00000323144 PRSS1P07477 247 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 FER1L6-AS1Q8NA97 138 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 DEFB104AQ8WTQ1 72 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
TPM3-204ENST00000323144 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 PANO1I0J062 215 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 M0QY20 66 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 SMIM17P0DL12 118 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 MIAQ16674 131 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 C14orf177Q52M58 125 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 LINC00269Q8N2A0 174 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 GFRA4Q9GZZ7 299 aa7.98□□□□□ -1.13
TPM3-204ENST00000323144 IGLV10-54A0A075B6I4 117 aa7.97□□□□□ -1.13
TPM3-204ENST00000323144 TRBV25-1A0A075B6N4 114 aa7.97□□□□□ -1.13
TPM3-204ENST00000323144 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
TPM3-204ENST00000323144 NKX2-5P52952 324 aaPredicted RBP7.97□□□□□ -1.13
TPM3-204ENST00000323144 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
TPM3-204ENST00000323144 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
TPM3-204ENST00000323144 TRAV1-1A0A0B4J248 108 aa7.96□□□□□ -1.14
TPM3-204ENST00000323144 IGHV1-24A0A0C4DH33 117 aa7.96□□□□□ -1.14
TPM3-204ENST00000323144 GNG4P50150 75 aa7.96□□□□□ -1.14
TPM3-204ENST00000323144 PKIAP61925 76 aa7.96□□□□□ -1.14
TPM3-204ENST00000323144 EIF5AP63241 154 aaKnown RBP7.96□□□□□ -1.14
TPM3-204ENST00000323144 MEF2BQ02080 365 aaPredicted RBP7.96□□□□□ -1.14
TPM3-204ENST00000323144 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.96□□□□□ -1.14
TPM3-204ENST00000323144 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.14
TPM3-204ENST00000323144 IGLV4-60A0A075B6I1 120 aa7.95□□□□□ -1.14
TPM3-204ENST00000323144 BCL2P10415 239 aa7.95□□□□□ -1.14
TPM3-204ENST00000323144 CTRLP40313 264 aa7.95□□□□□ -1.14
TPM3-204ENST00000323144 SULT1A2P50226 295 aa7.95□□□□□ -1.14
TPM3-204ENST00000323144 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
TPM3-204ENST00000323144 P01737 135 aa7.94□□□□□ -1.14
TPM3-204ENST00000323144 RPS20P60866 119 aaKnown RBP7.94□□□□□ -1.14
TPM3-204ENST00000323144 RPL37AP61513 92 aaKnown RBP7.94□□□□□ -1.14
TPM3-204ENST00000323144 REG3AQ06141 175 aa7.94□□□□□ -1.14
TPM3-204ENST00000323144 LYZL1Q6UWQ5 148 aa7.94□□□□□ -1.14
TPM3-204ENST00000323144 HMCN2Q8NDA2 5059 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 TRAV26-2A0A0B4J265 109 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 H7C1H1 209 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 CACNG7P62955 275 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 RASL11AQ6T310 242 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 DAZAP1Q96EP5 407 aaKnown RBP7.93□□□□□ -1.14
TPM3-204ENST00000323144 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 TMEM243Q9BU79 118 aa7.93□□□□□ -1.14
TPM3-204ENST00000323144 K7EN84 100 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 PDE6DO43924 150 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 TRGC1P0CF51 173 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 RAB5CP51148 216 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 MED9Q9NWA0 146 aa7.92□□□□□ -1.14
TPM3-204ENST00000323144 IFNA1P01562 189 aa7.91□□□□□ -1.14
TPM3-204ENST00000323144 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
TPM3-204ENST00000323144 AMTP48728 403 aa7.91□□□□□ -1.14
TPM3-204ENST00000323144 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
TPM3-204ENST00000323144 RNASE7Q9H1E1 156 aaKnown RBP7.91□□□□□ -1.14
TPM3-204ENST00000323144 hDV102S1A0JD36 115 aa7.9□□□□□ -1.14
TPM3-204ENST00000323144 NTF3P20783 257 aa7.9□□□□□ -1.14
TPM3-204ENST00000323144 TCTE3Q8IZS6 198 aa7.9□□□□□ -1.14
TPM3-204ENST00000323144 C15orf56Q8N910 161 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms