RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NSUN5P1Q3KNT7 163 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 TMEM61Q8N0U2 210 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 Q8N8P6 123 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 IGHV3-64A0A075B6Q5 118 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 GAGE12HA6NDE8 117 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 LY6G6DO95868 133 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 DEFB131AP59861 70 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 SCGB1D4Q6XE38 83 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 ZFP2Q6ZN57 461 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 SCGB3A1Q96QR1 104 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 ZMAT4Q9H898 229 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 ANK3Q12955 4377 aaKnown RBP5.65□□□□□ -1.5
TRIM55-202ENST00000315962 LINC01006Q8NI28 216 aa5.65□□□□□ -1.5
TRIM55-202ENST00000315962 LINC00477Q96M19 166 aa5.65□□□□□ -1.5
TRIM55-202ENST00000315962 SPXQ9BT56 116 aa5.65□□□□□ -1.5
TRIM55-202ENST00000315962 LINC01549A6NIU2 74 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 OR11H12B2RN74 326 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 E9PLD3 99 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 H7C2G1 150 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 LINC01559Q495D7 138 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 FOXI2Q6ZQN5 318 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 OR11H2Q8NH07 326 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 FAM110AQ9BQ89 295 aa5.65□□□□□ -1.51
TRIM55-202ENST00000315962 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.51
TRIM55-202ENST00000315962 A0A087WX48 190 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 RBAKDNA6NC62 111 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 LINC01619G3V211 115 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 CD7P09564 240 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 PSMB2P49721 201 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 SNRPD3P62318 126 aaKnown RBP5.64□□□□□ -1.51
TRIM55-202ENST00000315962 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 IGHV3OR16-12A0A075B7B8 117 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 A0A087WWL8 130 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 ZNF815PA8K554 130 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 ATP5LO75964 103 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
TRIM55-202ENST00000315962 RPL39P62891 51 aaKnown RBP5.64□□□□□ -1.51
TRIM55-202ENST00000315962 SRSF9Q13242 221 aaKnown RBP eCLIP5.64□□□□□ -1.51
TRIM55-202ENST00000315962 GAGE13Q4V321 117 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 FAM74A4Q5TZK3 123 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 MDFICQ9P1T7 246 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 STAB1Q9NY15 2570 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 K7EMT4 169 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 ID1P41134 155 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 DYNLRB2Q8TF09 96 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 RASL10AQ92737 203 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 TM2D2Q9BX73 214 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 PHLDA3Q9Y5J5 127 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 TNFRSF18Q9Y5U5 241 aa5.64□□□□□ -1.51
TRIM55-202ENST00000315962 MAST4O15021 2626 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 FBN1P35555 2871 aaKnown RBP5.63□□□□□ -1.51
TRIM55-202ENST00000315962 OVOL1O14753 267 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 MORN3Q6PF18 240 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-202ENST00000315962 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-202ENST00000315962 WFDC10AQ9H1F0 79 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 ZNF580Q9UK33 172 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 F8VRH5 84 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 TSPAN13O95857 204 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 FHL3Q13643 280 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 FAM159AQ6UWV7 190 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 SYT8Q8NBV8 401 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 HIGD1BQ9P298 99 aa5.63□□□□□ -1.51
TRIM55-202ENST00000315962 TRBV7-3A0A075B6L6 115 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 IGHV3-73A0A0B4J1V6 119 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 TRAV21A0A0B4J279 112 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 MYMXA0A1B0GTQ4 84 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 K7EQG2 157 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 CCL24O00175 119 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 SUMO2P61956 95 aaKnown RBP5.62□□□□□ -1.51
TRIM55-202ENST00000315962 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 F5H697 171 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 SMCPP49901 116 aaPredicted RBP5.62□□□□□ -1.51
TRIM55-202ENST00000315962 COX8CQ7Z4L0 72 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 NFE4Q86UQ8 179 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 Q8N2B8 174 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 C4orf3Q8WVX3 66 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 KIR2DL4Q99706 377 aa5.62□□□□□ -1.51
TRIM55-202ENST00000315962 A0A0J9YX75 114 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 H7C1H1 209 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 RNASE3P12724 160 aaKnown RBP5.61□□□□□ -1.51
TRIM55-202ENST00000315962 CKS1BP61024 79 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 HERV-K104P63124 156 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 Q8N1Y9 231 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1A1P0DJD3 496 aaKnown RBP5.61□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1CP0DJD4 496 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 ASIPP42127 132 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 TSPEAR-AS2P59090 65 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 RBMY1FQ15415 496 aaKnown RBP5.61□□□□□ -1.51
TRIM55-202ENST00000315962 TMEM170BQ5T4T1 132 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 SPATA3Q8NHX4 192 aa5.61□□□□□ -1.51
TRIM55-202ENST00000315962 MRPL53Q96EL3 112 aaKnown RBP5.61□□□□□ -1.51
TRIM55-202ENST00000315962 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 418 ms