RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NDUFA4O00483 81 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 ID1P41134 155 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 CRIP2P52943 208 aaPredicted RBP8.38□□□□□ -1.07
PTPN7-201ENST00000309017 NPC2P61916 151 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 TIMM17AQ99595 171 aa8.38□□□□□ -1.07
PTPN7-201ENST00000309017 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
PTPN7-201ENST00000309017 SPXQ9BT56 116 aa8.37□□□□□ -1.07
PTPN7-201ENST00000309017 B5MCH6 92 aa8.37□□□□□ -1.07
PTPN7-201ENST00000309017 GATA3P23771 443 aa8.37□□□□□ -1.07
PTPN7-201ENST00000309017 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 POLR2KP53803 58 aaKnown RBP8.36□□□□□ -1.07
PTPN7-201ENST00000309017 MUC4Q99102 2169 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 ZNF876PQ49A33 203 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 C11orf71Q6IPW1 123 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 KLK9Q9UKQ9 250 aa8.36□□□□□ -1.07
PTPN7-201ENST00000309017 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
PTPN7-201ENST00000309017 TRAV8-4A0A0B4J246 113 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 FBXL19-AS1Q494R0 122 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 DAZ1Q9NQZ3 744 aaKnown RBP8.35□□□□□ -1.07
PTPN7-201ENST00000309017 IGHV4OR15-8A0A075B7B6 117 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 A0A087WW49 117 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
PTPN7-201ENST00000309017 LEPROTO15243 131 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 CD28P10747 220 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 ADORA2A-AS1P86434 159 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
PTPN7-201ENST00000309017 GAGE5Q13069 117 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 GAGE6Q13070 117 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 RNASE13Q5GAN3 156 aaKnown RBP8.34□□□□□ -1.07
PTPN7-201ENST00000309017 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 ITPR3Q14573 2671 aa8.34□□□□□ -1.07
PTPN7-201ENST00000309017 K7ENP7 123 aa8.34□□□□□ -1.08
PTPN7-201ENST00000309017 COX6CP09669 75 aa8.34□□□□□ -1.08
PTPN7-201ENST00000309017 C2orf82Q6UX34 121 aa8.34□□□□□ -1.08
PTPN7-201ENST00000309017 CRYBG3Q68DQ2 2970 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 H3BUX3 64 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 SOCS3O14543 225 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 LINC00315P59091 139 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 Q8N1Y9 231 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 KIF25-AS1Q9Y6Z4 181 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 SPINK13Q1W4C9 94 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 AJUBAQ96IF1 538 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 USMG5Q96IX5 58 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 M0R2P5 195 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 ZNF580Q9UK33 172 aa8.33□□□□□ -1.08
PTPN7-201ENST00000309017 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 RHODO00212 210 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 EDN2P20800 178 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 TRAV4A0A0B4J268 109 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 H3BMM0 161 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-201ENST00000309017 BLCAPP62952 87 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 ATRQ13535 2644 aa8.32□□□□□ -1.08
PTPN7-201ENST00000309017 TMEM263Q8WUH6 116 aaKnown RBP8.32□□□□□ -1.08
PTPN7-201ENST00000309017 AKAP9Q99996 3911 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 A0A1W2PPR1 153 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 LMO4P61968 165 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 SNRPD3P62318 126 aaKnown RBP8.31□□□□□ -1.08
PTPN7-201ENST00000309017 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
PTPN7-201ENST00000309017 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 I3L3M4 83 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 RHOHQ15669 191 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 NACAE9PAV3 2078 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
PTPN7-201ENST00000309017 A0A0J9YXY3 114 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 KLLNB2CW77 178 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 IFITM1P13164 125 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 SBSPONQ8IVN8 264 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 C20orf203Q8NBC4 194 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 WNK1Q9H4A3 2382 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 M0QY20 66 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 LGALS9O00182 355 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 ELANEP08246 267 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
PTPN7-201ENST00000309017 TRIAP1O43715 76 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 NXPH4O95158 308 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
PTPN7-201ENST00000309017 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
PTPN7-201ENST00000309017 CFAP46Q8IYW2 2715 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 IGHV1OR15-1A0A075B7D0 117 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 TRBV7-9A0A0J9YWB2 115 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 CRLF1O75462 422 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
PTPN7-201ENST00000309017 AMELXQ99217 191 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 KNCNA6PVL3 124 aa8.29□□□□□ -1.08
PTPN7-201ENST00000309017 TNFRSF18Q9Y5U5 241 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms