RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 PRR4Q16378 134 aa10.9□□□□□ -0.66
CHRNA7-201ENST00000306901 FANCD2OSQ96PS1 177 aa10.9□□□□□ -0.66
CHRNA7-201ENST00000306901 DEFB135Q30KP9 77 aa10.9□□□□□ -0.66
CHRNA7-201ENST00000306901 C5orf56Q8N8D9 126 aa10.9□□□□□ -0.66
CHRNA7-201ENST00000306901 PLXNA4Q9HCM2 1894 aa10.9□□□□□ -0.66
CHRNA7-201ENST00000306901 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 C20orf203Q8NBC4 194 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 NRGNQ92686 78 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 NCKAP5O14513 1909 aa10.89□□□□□ -0.67
CHRNA7-201ENST00000306901 ODF3L1Q8IXM7 274 aa10.88□□□□□ -0.67
CHRNA7-201ENST00000306901 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
CHRNA7-201ENST00000306901 DCANP1Q8TF63 244 aa10.88□□□□□ -0.67
CHRNA7-201ENST00000306901 TRIAP1O43715 76 aa10.88□□□□□ -0.67
CHRNA7-201ENST00000306901 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
CHRNA7-201ENST00000306901 C4orf48Q5BLP8 95 aa10.87□□□□□ -0.67
CHRNA7-201ENST00000306901 USP17L23D6RBM5 183 aa10.87□□□□□ -0.67
CHRNA7-201ENST00000306901 RBX1P62877 108 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 IGFL3Q6UXB1 125 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 IGLV2-8P01709 118 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 DOPEY2Q9Y3R5 2298 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 WT1P19544 449 aaPredicted RBP10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 KRTAP27-1Q3LI81 207 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 TRBV6-1A0A0K0K1D8 114 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 LINC00269Q8N2A0 174 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 FRMPD3Q5JV73 1810 aa10.86□□□□□ -0.67
CHRNA7-201ENST00000306901 A0A1B0GXF2 115 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 CXCL5P42830 114 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 RNF138Q8WVD3 245 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 NACAE9PAV3 2078 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 CACNA1EQ15878 2313 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 C3orf84H3BNL1 204 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 PLXNA2O75051 1894 aa10.85□□□□□ -0.67
CHRNA7-201ENST00000306901 NLRC5Q86WI3 1866 aa10.84□□□□□ -0.67
CHRNA7-201ENST00000306901 A8MZ25 164 aa10.84□□□□□ -0.67
CHRNA7-201ENST00000306901 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
CHRNA7-201ENST00000306901 MED14OSP0DP75 135 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 NDUFA7O95182 113 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 TMEM223A0PJW6 202 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 OBSL1O75147 1896 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 FNDC1Q4ZHG4 1894 aaPredicted RBP10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 IGKV1D-37A0A075B6S9 117 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 IGF1P05019 195 aa10.83□□□□□ -0.68
CHRNA7-201ENST00000306901 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
CHRNA7-201ENST00000306901 C11orf1Q9H5F2 150 aa10.82□□□□□ -0.68
CHRNA7-201ENST00000306901 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
CHRNA7-201ENST00000306901 Q8N7P7 452 aa10.82□□□□□ -0.68
CHRNA7-201ENST00000306901 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
CHRNA7-201ENST00000306901 TIMM17BO60830 172 aa10.81□□□□□ -0.68
CHRNA7-201ENST00000306901 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
CHRNA7-201ENST00000306901 A6NED7 52 aa10.81□□□□□ -0.68
CHRNA7-201ENST00000306901 LTBP1Q14766 1721 aa10.81□□□□□ -0.68
CHRNA7-201ENST00000306901 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
CHRNA7-201ENST00000306901 IGHV4-30-4P0DP06 118 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 IGHV4-31P0DP07 118 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 ABCA1O95477 2261 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 PDE6GP18545 87 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 INSL3P51460 131 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 C1orf195Q5TG92 126 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 Q6ZTI0 123 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 C1orf158Q8N1D5 194 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
CHRNA7-201ENST00000306901 PROK1P58294 105 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 SPTBN1Q01082 2364 aaKnown RBP10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 LINC00308Q8TCZ7 52 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 A0A0J9YX75 114 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 ZNF22P17026 224 aaPredicted RBP10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 REG3AQ06141 175 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 HRCT1Q6UXD1 115 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 C20orf173Q96LM9 149 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 ZNF407Q9C0G0 2248 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 SPTA1P02549 2419 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 ZDBF2Q9HCK1 2354 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 M0QXV9 152 aa10.79□□□□□ -0.68
CHRNA7-201ENST00000306901 POM121L12Q8N7R1 296 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 DSCAML1Q8TD84 2053 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 LINC01548A6NM66 108 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 WFDC13Q8IUB5 93 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 USF3Q68DE3 2245 aa10.78□□□□□ -0.68
CHRNA7-201ENST00000306901 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.68
CHRNA7-201ENST00000306901 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
CHRNA7-201ENST00000306901 XGP55808 180 aa10.77□□□□□ -0.69
CHRNA7-201ENST00000306901 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
CHRNA7-201ENST00000306901 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
CHRNA7-201ENST00000306901 C4orf3Q8WVX3 66 aa10.76□□□□□ -0.69
CHRNA7-201ENST00000306901 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
CHRNA7-201ENST00000306901 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
CHRNA7-201ENST00000306901 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
CHRNA7-201ENST00000306901 C22orf34Q6ZV56 151 aa10.76□□□□□ -0.69
CHRNA7-201ENST00000306901 DEFB113Q30KQ7 82 aa10.75□□□□□ -0.69
CHRNA7-201ENST00000306901 MBD6Q96DN6 1003 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms