RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 SMIM27A0A1W2PRY6 76 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 LINC00862A6NCI5 91 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 LINC00315P59091 139 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 KCNIP4Q6PIL6 250 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 C6orf223Q8N319 242 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 C10orf126Q8N4M7 172 aa7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 DAZ3Q9NR90 486 aaKnown RBP7.52□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 DNAH1Q9P2D7 4330 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 A0A1B0GW15 77 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 K7EP13 123 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 M0QY20 66 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 S100A8P05109 93 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 DNAH10OSP0CZ25 163 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 ADCYAP1P18509 176 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 LINC00336Q6ZUF6 198 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TMEM191AQ9H0A3 160 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TRAV26-2A0A0B4J265 109 aa7.5□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 BTF3P20290 206 aaKnown RBP7.5□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 FRZBQ92765 325 aa7.5□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 RYR2Q92736 4967 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TRBV25-1A0A075B6N4 114 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 CAMPP49913 170 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 PKIAP61925 76 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 HBBP68871 147 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 MRPL54Q6P161 138 aaKnown RBP7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 GATD1Q8NB37 220 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 KRTAP1-5Q9BYS1 174 aa7.49□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 A0A087WX48 190 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 ATP5L2Q7Z4Y8 100 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 RTL8CO15255 209 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 COTL1Q14019 142 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 NDUFA5Q16718 116 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 CHCHD7Q9BUK0 85 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 CTDSP1Q9GZU7 261 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 RYR3Q15413 4870 aa7.46□□□□□ -1.21
CSPG4P1Y-201ENST00000306641 PPP1R17O96001 155 aa7.46□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 RAB4AP20338 218 aa7.46□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 NIT1Q86X76 327 aa7.46□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 RNF185Q96GF1 192 aa7.46□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 UBE2L6O14933 153 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 NCR2O95944 276 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 S100PP25815 95 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 AMTP48728 403 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 LAGE3Q14657 143 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 ELOBQ15370 118 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 RHEBQ15382 184 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 FAM104BQ5XKR9 115 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 BTF3L4Q96K17 158 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 IMMP2LQ96T52 175 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 CARHSP1Q9Y2V2 147 aaKnown RBP7.45□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 APCSP02743 223 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 PMCHP20382 165 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 CKS2P33552 79 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 IQCJQ1A5X6 159 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 C10orf91Q5T1B1 145 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 Q9HAA7 133 aa7.44□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 I3L3M4 83 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 PSCAO43653 123 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 CRPP02741 224 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 GAGE6Q13070 117 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 NTM-AS1Q6ZSK4 140 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 Q8N3U1 123 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 RPS10P5Q9NQ39 176 aa7.43□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 TRAV9-1A0A075B6T8 112 aa7.42□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 APOC3P02656 99 aa7.42□□□□□ -1.22
CSPG4P1Y-201ENST00000306641 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms