RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CXCL1P09341 107 aa6.46□□□□□ -1.37
PCDHB1-201ENST00000306549 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 A6NDX4 124 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 RS1O15537 224 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 Q6ZRM9 215 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 SMIM20Q8N5G0 67 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 ZNF491Q8N8L2 437 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 IGKV4-1P06312 121 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 MLANAQ16655 118 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 SPATA25Q9BR10 227 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 CEND1Q8N111 149 aa6.46□□□□□ -1.38
PCDHB1-201ENST00000306549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 IGKV2-29A2NJV5 120 aaPredicted RBP6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 A8MWP6 167 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 DLEU1O43261 78 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 SLURP1P55000 103 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 HILS1P60008 231 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 SRSF3P84103 164 aaKnown RBP6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 DEFB136Q30KP8 78 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 ZFP2Q6ZN57 461 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 LINC00479Q96M42 142 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 ODF3BA8MYP8 253 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 C11orf45Q8TAV5 145 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 SND1-IT1Q9HBX3 110 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 PDE6GP18545 87 aa6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
PCDHB1-201ENST00000306549 APRG1Q8IVJ8 170 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 JMJD7-PLA2G4BH0Y9G9 81 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 ZFP36P26651 326 aaKnown RBP6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 UBE2D1P51668 147 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 GTSF1Q8WW33 167 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 C18orf32Q8TCD1 76 aa6.44□□□□□ -1.38
PCDHB1-201ENST00000306549 SPRY2O43597 315 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 DUX4L9Q6RFH8 374 aaPredicted RBP6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 RNF144BQ7Z419 303 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 EBI3Q14213 229 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 DEFB125Q8N687 156 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 CENPEQ02224 2701 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 GAGE12HA6NDE8 117 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 SIVA1O15304 175 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 NDUFA7O95182 113 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 BLCAPP62952 87 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 MED14OSP0DP75 135 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 COX8AP10176 69 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 LINC00205P59089 165 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 K7EIM0 57 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR20EP86478 221 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR20CP86479 221 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR20DP86480 221 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR20BP86481 221 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR20AP86496 221 aa6.43□□□□□ -1.38
PCDHB1-201ENST00000306549 PSMB8P28062 276 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 ATRAIDQ6UW56 229 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 I3L2K1 104 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 CFC1P0CG37 223 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 FGF23Q9GZV9 251 aaPredicted RBP6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 A0A0G2JRQ6 117 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 SMIM27A0A1W2PRY6 76 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 Q8N7P7 452 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 C11orf52Q96A22 123 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 PSMG3-AS1Q96PY0 264 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 SRCAPQ6ZRS2 3230 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 TMEM263Q8WUH6 116 aaKnown RBP6.42□□□□□ -1.38
PCDHB1-201ENST00000306549 GNRH2O43555 120 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 FXYD5Q96DB9 178 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 KLK12Q9UKR0 248 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 CYTL1Q9NRR1 136 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 TRBV12-3P01733 135 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 TMEM256-PLSCR3K7ERE1 68 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 CCL25O15444 150 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 IGLC2P0DOY2 106 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 IGLC3P0DOY3 106 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 COLCA2A8K830 154 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 NPYP01303 97 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
PCDHB1-201ENST00000306549 LYRM9A8MSI8 78 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 ATOX1O00244 68 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 CTSGP08311 255 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 ODF3L1Q8IXM7 274 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 WFDC11Q8NEX6 87 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 UPK3BQ9BT76 320 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 USP17L23D6RBM5 183 aa6.4□□□□□ -1.38
PCDHB1-201ENST00000306549 TEX22C9J3V5 150 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms