RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
RER1-201ENST00000306256 DEFB104AQ8WTQ1 72 aa13.35□□□□□ -0.27
RER1-201ENST00000306256 BCL2L11O43521 198 aa13.34□□□□□ -0.27
RER1-201ENST00000306256 H2AFB1P0C5Y9 115 aa13.34□□□□□ -0.27
RER1-201ENST00000306256 KRTAP29-1A8MX34 341 aaPredicted RBP13.33□□□□□ -0.28
RER1-201ENST00000306256 HLA-DQA1P01909 254 aa13.33□□□□□ -0.28
RER1-201ENST00000306256 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
RER1-201ENST00000306256 NTM-AS1Q6ZSK4 140 aa13.33□□□□□ -0.28
RER1-201ENST00000306256 TMUB2Q71RG4 321 aa13.33□□□□□ -0.28
RER1-201ENST00000306256 DERL1Q9BUN8 251 aa13.33□□□□□ -0.28
RER1-201ENST00000306256 KANTRA0A1W2PQU2 76 aa13.32□□□□□ -0.28
RER1-201ENST00000306256 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
RER1-201ENST00000306256 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
RER1-201ENST00000306256 KRTAP10-4P60372 401 aaPredicted RBP13.32□□□□□ -0.28
RER1-201ENST00000306256 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
RER1-201ENST00000306256 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.32□□□□□ -0.28
RER1-201ENST00000306256 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
RER1-201ENST00000306256 A0A0D9SG52 128 aa13.31□□□□□ -0.28
RER1-201ENST00000306256 HMSDA8MTL9 139 aa13.31□□□□□ -0.28
RER1-201ENST00000306256 SMIM17P0DL12 118 aa13.31□□□□□ -0.28
RER1-201ENST00000306256 GZMBP10144 247 aa13.31□□□□□ -0.28
RER1-201ENST00000306256 AP1S3Q96PC3 154 aa13.31□□□□□ -0.28
RER1-201ENST00000306256 CCL20P78556 96 aa13.3□□□□□ -0.28
RER1-201ENST00000306256 GAGE6Q13070 117 aa13.3□□□□□ -0.28
RER1-201ENST00000306256 VAX2Q9UIW0 290 aa13.3□□□□□ -0.28
RER1-201ENST00000306256 MGPP08493 103 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 PKIAP61925 76 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 RBX1P62877 108 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 MIAQ16674 131 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 TPPP3Q9BW30 176 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 GNG13Q9P2W3 67 aa13.29□□□□□ -0.28
RER1-201ENST00000306256 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
RER1-201ENST00000306256 CENPWQ5EE01 88 aa13.28□□□□□ -0.28
RER1-201ENST00000306256 C11orf52Q96A22 123 aa13.28□□□□□ -0.28
RER1-201ENST00000306256 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.29
RER1-201ENST00000306256 PRSS1P07477 247 aa13.27□□□□□ -0.29
RER1-201ENST00000306256 LINC00269Q8N2A0 174 aa13.27□□□□□ -0.29
RER1-201ENST00000306256 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
RER1-201ENST00000306256 IGLV2-8P01709 118 aa13.26□□□□□ -0.29
RER1-201ENST00000306256 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
RER1-201ENST00000306256 FER1L6-AS1Q8NA97 138 aa13.26□□□□□ -0.29
RER1-201ENST00000306256 OR2D3Q8NGH3 330 aa13.26□□□□□ -0.29
RER1-201ENST00000306256 PRR34Q9NV39 138 aa13.26□□□□□ -0.29
RER1-201ENST00000306256 M0QY20 66 aa13.25□□□□□ -0.29
RER1-201ENST00000306256 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
RER1-201ENST00000306256 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
RER1-201ENST00000306256 LRP1Q07954 4544 aaKnown RBP13.25□□□□□ -0.29
RER1-201ENST00000306256 RAB19A4D1S5 217 aa13.24□□□□□ -0.29
RER1-201ENST00000306256 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
RER1-201ENST00000306256 SUMO4Q6EEV6 95 aa13.24□□□□□ -0.29
RER1-201ENST00000306256 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
RER1-201ENST00000306256 DAZAP1Q96EP5 407 aaKnown RBP13.23□□□□□ -0.29
RER1-201ENST00000306256 IGLV10-54A0A075B6I4 117 aa13.22□□□□□ -0.29
RER1-201ENST00000306256 TRAV1-1A0A0B4J248 108 aa13.22□□□□□ -0.29
RER1-201ENST00000306256 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
RER1-201ENST00000306256 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
RER1-201ENST00000306256 H7C1H1 209 aa13.21□□□□□ -0.29
RER1-201ENST00000306256 GNG4P50150 75 aa13.21□□□□□ -0.29
RER1-201ENST00000306256 NKX2-5P52952 324 aaPredicted RBP13.21□□□□□ -0.29
RER1-201ENST00000306256 CACNG7P62955 275 aa13.21□□□□□ -0.29
RER1-201ENST00000306256 REG3AQ06141 175 aa13.21□□□□□ -0.29
RER1-201ENST00000306256 C9orf163Q8N9P6 203 aa13.21□□□□□ -0.29
RER1-201ENST00000306256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.21□□□□□ -0.29
RER1-201ENST00000306256 RPL37AP61513 92 aaKnown RBP13.2□□□□□ -0.3
RER1-201ENST00000306256 DGAT2L7PQ6IED9 249 aa13.2□□□□□ -0.3
RER1-201ENST00000306256 C20orf203Q8NBC4 194 aa13.2□□□□□ -0.3
RER1-201ENST00000306256 PANO1I0J062 215 aa13.19□□□□□ -0.3
RER1-201ENST00000306256 P01737 135 aa13.19□□□□□ -0.3
RER1-201ENST00000306256 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
RER1-201ENST00000306256 TRBV20OR9-2A0A075B6H5 130 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 RAB5CP51148 216 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 MEF2BQ02080 365 aaPredicted RBP13.18□□□□□ -0.3
RER1-201ENST00000306256 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 FAT3Q8TDW7 4589 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 PKHD1L1Q86WI1 4243 aa13.18□□□□□ -0.3
RER1-201ENST00000306256 IGLV4-60A0A075B6I1 120 aa13.17□□□□□ -0.3
RER1-201ENST00000306256 OXTP01178 125 aa13.17□□□□□ -0.3
RER1-201ENST00000306256 IFNA1P01562 189 aa13.17□□□□□ -0.3
RER1-201ENST00000306256 HNRNPA3P51991 378 aaKnown RBP13.17□□□□□ -0.3
RER1-201ENST00000306256 MED9Q9NWA0 146 aa13.17□□□□□ -0.3
RER1-201ENST00000306256 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
RER1-201ENST00000306256 TEX46H3BTG2 121 aa13.16□□□□□ -0.3
RER1-201ENST00000306256 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
RER1-201ENST00000306256 SULT1A2P50226 295 aa13.16□□□□□ -0.3
RER1-201ENST00000306256 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
RER1-201ENST00000306256 F2Z2F3 143 aa13.15□□□□□ -0.3
RER1-201ENST00000306256 PDE6DO43924 150 aa13.15□□□□□ -0.3
RER1-201ENST00000306256 NTF3P20783 257 aa13.15□□□□□ -0.3
RER1-201ENST00000306256 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
RER1-201ENST00000306256 DPH3P1Q9H4G8 78 aa13.15□□□□□ -0.3
RER1-201ENST00000306256 hDV102S1A0JD36 115 aa13.14□□□□□ -0.31
RER1-201ENST00000306256 BCL2P10415 239 aa13.14□□□□□ -0.31
RER1-201ENST00000306256 EIF5AL1Q6IS14 154 aaKnown RBP13.14□□□□□ -0.31
RER1-201ENST00000306256 CLRN3Q8NCR9 226 aa13.14□□□□□ -0.31
RER1-201ENST00000306256 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
RER1-201ENST00000306256 A0A1B0GUV1 79 aa13.13□□□□□ -0.31
RER1-201ENST00000306256 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
RER1-201ENST00000306256 TRAV8-4A0A0B4J246 113 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms