RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
CSDC2-201ENST00000306149 EPG5Q9HCE0 2579 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 LGALS9O00182 355 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 C9orf85Q96MD7 179 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
CSDC2-201ENST00000306149 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 LINC01356Q8N9X3 169 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 ODF3Q96PU9 254 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 A0A0J9YY99 117 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
CSDC2-201ENST00000306149 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
CSDC2-201ENST00000306149 WNK1Q9H4A3 2382 aa11.19□□□□□ -0.62
CSDC2-201ENST00000306149 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 M0QY20 66 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 TSPAN13O95857 204 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
CSDC2-201ENST00000306149 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 ZNF580Q9UK33 172 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 NF1P21359 2839 aa11.18□□□□□ -0.62
CSDC2-201ENST00000306149 CHD6Q8TD26 2715 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 PRB1P04280 392 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 A0A1B0GV72 72 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 UBE2D3P61077 147 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 UBE2D2P62837 147 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
CSDC2-201ENST00000306149 GATA3P23771 443 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
CSDC2-201ENST00000306149 APOMO95445 188 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
CSDC2-201ENST00000306149 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
CSDC2-201ENST00000306149 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 P0DMU3 169 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 NSUN5P1Q3KNT7 163 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 LYRM7Q5U5X0 104 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
CSDC2-201ENST00000306149 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
CSDC2-201ENST00000306149 NDUFA11Q86Y39 141 aa11.15□□□□□ -0.62
CSDC2-201ENST00000306149 A0A096LNT2 108 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 IGHV3-30P01768 117 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 SLURP1P55000 103 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 PROK1P58294 105 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 RHOHQ15669 191 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 AMELXQ99217 191 aa11.15□□□□□ -0.63
CSDC2-201ENST00000306149 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
CSDC2-201ENST00000306149 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 SLC25A29Q8N8R3 303 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 INSL3P51460 131 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
CSDC2-201ENST00000306149 CCDC168Q8NDH2 2452 aa11.13□□□□□ -0.63
CSDC2-201ENST00000306149 DSCR9P59020 149 aa11.13□□□□□ -0.63
CSDC2-201ENST00000306149 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
CSDC2-201ENST00000306149 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
CSDC2-201ENST00000306149 Q9UF83 564 aa11.13□□□□□ -0.63
CSDC2-201ENST00000306149 PSMB2P49721 201 aa11.12□□□□□ -0.63
CSDC2-201ENST00000306149 DEFB131AP59861 70 aa11.12□□□□□ -0.63
CSDC2-201ENST00000306149 FOXI1Q12951 378 aa11.12□□□□□ -0.63
CSDC2-201ENST00000306149 J3QQQ9 107 aa11.12□□□□□ -0.63
CSDC2-201ENST00000306149 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
CSDC2-201ENST00000306149 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
CSDC2-201ENST00000306149 TRAV26-1A0A087WT03 109 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 CFC1P0CG37 223 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 CKS1BP61024 79 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
CSDC2-201ENST00000306149 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
CSDC2-201ENST00000306149 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
CSDC2-201ENST00000306149 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 ELANEP08246 267 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 CEMP1Q6PRD7 247 aaPredicted RBP11.1□□□□□ -0.63
CSDC2-201ENST00000306149 Q6YL49 198 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 C10orf126Q8N4M7 172 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 C2CD3Q4AC94 2353 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 TMEM223A0PJW6 202 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 LEPROTO15243 131 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
CSDC2-201ENST00000306149 I3L3M4 83 aa11.09□□□□□ -0.63
CSDC2-201ENST00000306149 CRYBA4P53673 196 aa11.09□□□□□ -0.63
CSDC2-201ENST00000306149 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms