RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MED14OSP0DP75 135 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
PTPRE-202ENST00000306042 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
PTPRE-202ENST00000306042 ADCYAP1P18509 176 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 TDRG1Q3Y452 100 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 CST9LQ9H4G1 147 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 FSHBP01225 129 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 PMVKQ15126 192 aa6.92□□□□□ -1.3
PTPRE-202ENST00000306042 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 LY6G6CO95867 125 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 CFAP46Q8IYW2 2715 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 GDF5OSQ5U4N7 250 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 MSRB1Q9NZV6 116 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 F8WEM9 126 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 CDK2AP2O75956 126 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 FRMD6-AS1P0C7T7 363 aa6.91□□□□□ -1.3
PTPRE-202ENST00000306042 COLCA2A8K830 154 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 PRSS29PA6NIE9 313 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 BRI3O95415 125 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
PTPRE-202ENST00000306042 GTF2H5Q6ZYL4 71 aa6.9□□□□□ -1.3
PTPRE-202ENST00000306042 TRBV6-1A0A0K0K1D8 114 aa6.9□□□□□ -1.31
PTPRE-202ENST00000306042 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.31
PTPRE-202ENST00000306042 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.31
PTPRE-202ENST00000306042 Q0VG73 95 aa6.9□□□□□ -1.31
PTPRE-202ENST00000306042 C18orf32Q8TCD1 76 aa6.9□□□□□ -1.31
PTPRE-202ENST00000306042 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.31
PTPRE-202ENST00000306042 HERVK_113P63121 156 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 TRBV10-1A0A0K0K1A3 114 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 LGALS9BQ3B8N2 356 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 Q8N2B8 174 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
PTPRE-202ENST00000306042 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 PFN2P35080 140 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 NPC2P61916 151 aa6.89□□□□□ -1.31
PTPRE-202ENST00000306042 RPL24P83731 157 aaKnown RBP6.88□□□□□ -1.31
PTPRE-202ENST00000306042 DCANP1Q8TF63 244 aa6.88□□□□□ -1.31
PTPRE-202ENST00000306042 ODF3L2Q3SX64 289 aa6.88□□□□□ -1.31
PTPRE-202ENST00000306042 SPANXA1Q9NS26 97 aa6.88□□□□□ -1.31
PTPRE-202ENST00000306042 TRAV8-2A0A0B4J237 113 aa6.88□□□□□ -1.31
PTPRE-202ENST00000306042 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
PTPRE-202ENST00000306042 CENPEQ02224 2701 aa6.88□□□□□ -1.31
PTPRE-202ENST00000306042 K7EMI3 77 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 A0A0J9YWU9 116 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 FABP2P12104 132 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
PTPRE-202ENST00000306042 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 C5orf38Q86SI9 138 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 WWC2-AS2Q96NR7 200 aa6.87□□□□□ -1.31
PTPRE-202ENST00000306042 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 G3V4G9 280 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 NXPH4O95158 308 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 UBE2BP63146 152 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 EDN2P20800 178 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 ZNF479Q96JC4 524 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 LEPROTO15243 131 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 FGF6P10767 208 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 CTRLP40313 264 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 ZFAND2AQ8N6M9 145 aa6.86□□□□□ -1.31
PTPRE-202ENST00000306042 COX7A2LO14548 114 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 RETNQ9HD89 108 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 C3orf79P0CE67 100 aa6.85□□□□□ -1.31
PTPRE-202ENST00000306042 NANOS2P60321 138 aaKnown RBP6.84□□□□□ -1.31
PTPRE-202ENST00000306042 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 GTSF1LQ9H1H1 148 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 UNC80Q8N2C7 3258 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 ORAOV1Q8WV07 137 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 CRYGDP07320 174 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 ZFP2Q6ZN57 461 aa6.84□□□□□ -1.31
PTPRE-202ENST00000306042 hDV102S1A0JD36 115 aa6.84□□□□□ -1.32
PTPRE-202ENST00000306042 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
PTPRE-202ENST00000306042 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
PTPRE-202ENST00000306042 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
PTPRE-202ENST00000306042 SPINK8P0C7L1 97 aa6.83□□□□□ -1.32
PTPRE-202ENST00000306042 HIST3H2BBQ8N257 126 aa6.83□□□□□ -1.32
PTPRE-202ENST00000306042 CDH23Q9H251 3354 aa6.83□□□□□ -1.32
PTPRE-202ENST00000306042 ESDP10768 282 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 IGLV2-18A0A075B6J9 118 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 C3orf84H3BNL1 204 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 ODF1Q14990 250 aa6.82□□□□□ -1.32
PTPRE-202ENST00000306042 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
PTPRE-202ENST00000306042 FLNAP21333 2647 aaKnown RBP6.82□□□□□ -1.32
PTPRE-202ENST00000306042 ITPR3Q14573 2671 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms