RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 LINC01356Q8N9X3 169 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 TRAV12-3A0A0B4J271 114 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 A4D1N5 150 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 PPDPFLQ8WWR9 84 aa13.26□□□□□ -0.29
TSPAN17-201ENST00000298564 PMVKQ15126 192 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 ZFYVE26Q68DK2 2539 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 SDHAF1A6NFY7 115 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 LINC01619G3V211 115 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 PSMB8P28062 276 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 SS18L2Q9UHA2 77 aa13.25□□□□□ -0.29
TSPAN17-201ENST00000298564 LINC00315P59091 139 aa13.24□□□□□ -0.29
TSPAN17-201ENST00000298564 C10orf126Q8N4M7 172 aa13.24□□□□□ -0.29
TSPAN17-201ENST00000298564 HERVK_113P61574 105 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 NPC2P61916 151 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 PRO1854Q9UHT4 67 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 J3QQQ9 107 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 Q1RN00 199 aa13.23□□□□□ -0.29
TSPAN17-201ENST00000298564 ZNF688P0C7X2 276 aa13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 LGALS3P17931 250 aaKnown RBP13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 TRBV20-1A0A075B6N2 111 aa13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 A0A096LNT2 108 aa13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 ANKRD17O75179 2603 aaKnown RBP13.22□□□□□ -0.29
TSPAN17-201ENST00000298564 K7EMT4 169 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 ATP6V0E2Q8NHE4 81 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 ANAPC13Q9BS18 74 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 ZNF462Q96JM2 2506 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 SLC25A20O43772 301 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 DCANP1Q8TF63 244 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 KIF25-AS1Q9Y6Z4 181 aa13.21□□□□□ -0.29
TSPAN17-201ENST00000298564 CRLF1O75462 422 aa13.21□□□□□ -0.3
TSPAN17-201ENST00000298564 FAM159AQ6UWV7 190 aa13.21□□□□□ -0.3
TSPAN17-201ENST00000298564 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.3
TSPAN17-201ENST00000298564 MUSTN1Q8IVN3 82 aa13.21□□□□□ -0.3
TSPAN17-201ENST00000298564 MDFICQ9P1T7 246 aa13.21□□□□□ -0.3
TSPAN17-201ENST00000298564 HTN1P15515 57 aa13.2□□□□□ -0.3
TSPAN17-201ENST00000298564 Q6ZSV7 163 aa13.2□□□□□ -0.3
TSPAN17-201ENST00000298564 AMELXQ99217 191 aa13.2□□□□□ -0.3
TSPAN17-201ENST00000298564 ZNF56Q15929 161 aa13.2□□□□□ -0.3
TSPAN17-201ENST00000298564 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
TSPAN17-201ENST00000298564 IGHV3-73A0A0B4J1V6 119 aa13.19□□□□□ -0.3
TSPAN17-201ENST00000298564 POLR2KP53803 58 aaKnown RBP13.19□□□□□ -0.3
TSPAN17-201ENST00000298564 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
TSPAN17-201ENST00000298564 ID1P41134 155 aa13.19□□□□□ -0.3
TSPAN17-201ENST00000298564 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 CEMP1Q6PRD7 247 aaPredicted RBP13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 NTN5Q8WTR8 489 aaPredicted RBP13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 NACAE9PAV3 2078 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 TEX49A0A1B0GTD5 131 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 B5MCH6 92 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 PRSS2P07478 247 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 SPXQ9BT56 116 aa13.18□□□□□ -0.3
TSPAN17-201ENST00000298564 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 TRAV4A0A0B4J268 109 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 A8MZ25 164 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 VCYO14598 125 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 TRBV7-9A0A0J9YWB2 115 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 KLLNB2CW77 178 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 J3QLI3 93 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 ERG28Q9UKR5 140 aa13.17□□□□□ -0.3
TSPAN17-201ENST00000298564 PRM2P04554 102 aa13.16□□□□□ -0.3
TSPAN17-201ENST00000298564 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
TSPAN17-201ENST00000298564 MXRA5Q9NR99 2828 aa13.16□□□□□ -0.3
TSPAN17-201ENST00000298564 KRTAP10-9P60411 292 aa13.16□□□□□ -0.3
TSPAN17-201ENST00000298564 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
TSPAN17-201ENST00000298564 IGHV3-33P01772 117 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 SYNJ2BPP57105 145 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 LYRM7Q5U5X0 104 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 ZFAND6Q6FIF0 208 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
TSPAN17-201ENST00000298564 P0DMU3 169 aa13.14□□□□□ -0.31
TSPAN17-201ENST00000298564 FAM231AP0DMU4 169 aa13.14□□□□□ -0.31
TSPAN17-201ENST00000298564 FAM231CP0DMU5 169 aa13.14□□□□□ -0.31
TSPAN17-201ENST00000298564 VPREB3Q9UKI3 123 aa13.14□□□□□ -0.31
TSPAN17-201ENST00000298564 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
TSPAN17-201ENST00000298564 Q8N1Y9 231 aa13.13□□□□□ -0.31
TSPAN17-201ENST00000298564 TMEM263Q8WUH6 116 aaKnown RBP13.13□□□□□ -0.31
TSPAN17-201ENST00000298564 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
TSPAN17-201ENST00000298564 PROK1P58294 105 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 Q9UF83 564 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 A0A087WW49 117 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 TMEM89A2RUT3 159 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 IGHV4-31P0DP07 118 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 PAPPA-AS1Q5QFB9 102 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 Q6YL49 198 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 PPP1R17O96001 155 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
TSPAN17-201ENST00000298564 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms