RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 ERG28Q9UKR5 140 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 COL6A6A6NMZ7 2263 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 VPS13CQ709C8 3753 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 C9JAW5 83 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
CCDC36-201ENST00000296449 ID1P41134 155 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 ZNF56Q15929 161 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 ODF3Q96PU9 254 aa7.56□□□□□ -1.2
CCDC36-201ENST00000296449 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 BLCAPP62952 87 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 HERV-K104P63124 156 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.55□□□□□ -1.2
CCDC36-201ENST00000296449 H7C2G1 150 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 K7EMT4 169 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 RHODO00212 210 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
CCDC36-201ENST00000296449 TRAV12-2A0A075B6T6 113 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 H3BUX3 64 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 CITED1Q99966 193 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 A0A0J9YXV3 536 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 A6NDX4 124 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 ELANEP08246 267 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 ZFAND6Q6FIF0 208 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 Q8N1Y9 231 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
CCDC36-201ENST00000296449 M0R2P5 195 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 IGKV3-20P01619 116 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 RNF183Q96D59 192 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
CCDC36-201ENST00000296449 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 TNFRSF18Q9Y5U5 241 aa7.53□□□□□ -1.2
CCDC36-201ENST00000296449 I3L3M4 83 aa7.52□□□□□ -1.21
CCDC36-201ENST00000296449 TEX29Q8N6K0 151 aa7.52□□□□□ -1.21
CCDC36-201ENST00000296449 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
CCDC36-201ENST00000296449 TRBV30A0A0K0K1B3 111 aa7.52□□□□□ -1.21
CCDC36-201ENST00000296449 CFHR3Q02985 330 aa7.52□□□□□ -1.21
CCDC36-201ENST00000296449 IGHV1OR15-1A0A075B7D0 117 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 IGHV4-61A0A0C4DH41 118 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 GATA3P23771 443 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
CCDC36-201ENST00000296449 Q1RN00 199 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 FAM110AQ9BQ89 295 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 ANAPC13Q9BS18 74 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 ADARB2-AS1A8MUL3 147 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 NTN5Q8WTR8 489 aaPredicted RBP7.51□□□□□ -1.21
CCDC36-201ENST00000296449 LITAFQ99732 161 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
CCDC36-201ENST00000296449 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
CCDC36-201ENST00000296449 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
CCDC36-201ENST00000296449 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
CCDC36-201ENST00000296449 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
CCDC36-201ENST00000296449 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
CCDC36-201ENST00000296449 TRIAP1O43715 76 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 Q6Q795 121 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 BEX4Q9NWD9 120 aaPredicted RBP7.49□□□□□ -1.21
CCDC36-201ENST00000296449 CACNA1AO00555 2505 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 C19orf84I3L1E1 186 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 UCNP55089 124 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 SNRPD3P62318 126 aaKnown RBP7.49□□□□□ -1.21
CCDC36-201ENST00000296449 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
CCDC36-201ENST00000296449 RNF152Q8N8N0 203 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
CCDC36-201ENST00000296449 TRAV8-3A0A0A6YYJ7 113 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 TEX49A0A1B0GTD5 131 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 K7EQG2 157 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 SNCGO76070 127 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 GAGE5Q13069 117 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 GAGE6Q13070 117 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 SPANXCQ9NY87 97 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 CRLF1O75462 422 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
CCDC36-201ENST00000296449 CD28P10747 220 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 ADAMTSL4-AS1Q5T5F5 129 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 ACACBO00763 2458 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 TRAV4A0A0B4J268 109 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 PRSS2P07478 247 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 PSMB8P28062 276 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
CCDC36-201ENST00000296449 PIMREGQ9BSJ6 248 aa7.48□□□□□ -1.21
CCDC36-201ENST00000296449 TRGV11A0A075B6L2 103 aa7.47□□□□□ -1.21
CCDC36-201ENST00000296449 IGHV1-58A0A0C4DH39 117 aa7.47□□□□□ -1.21
CCDC36-201ENST00000296449 C10orf99Q6UWK7 81 aa7.47□□□□□ -1.21
CCDC36-201ENST00000296449 DOPEY2Q9Y3R5 2298 aa7.47□□□□□ -1.21
CCDC36-201ENST00000296449 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
CCDC36-201ENST00000296449 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
CCDC36-201ENST00000296449 SORL1Q92673 2214 aa7.46□□□□□ -1.21
CCDC36-201ENST00000296449 IGHV3-73A0A0B4J1V6 119 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms